Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60446g00001 ATGGCTGCGTCTGTGGGTGGAAGTAGGCTTCAAAGCATGTTGCAAGCTGCAGTTCAATCTGTTCAATGGACCTACAGCCTCTTCTGGCAATTTTGTCCACAACAAATGATTTTGGTTTGGGGTGATGGTTACTATAATGGGGCAATTAAGACTAGAAAGACAGTGCAACCAATGGAGGTTAGTGCCGAGGAGGCATCTCTCCAAAGAAGCCAACAGCTCAGGGAACTCTATGACTCATTGTCAGCCGGAGAGACTAACCCGCCCACTCGCCGGCCTTGCGCCGCCTTGTCGCCGGAGGACCTAACGGAATCGGAATGGTTCTATTTGATGTGTGTCTCATTCTCATTTGCTCCTGGGGTAGG 362 0.5028 MAASVGGSRLQSMLQAAVQSVQWTYSLFWQFCPQQMILVWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYDSLSAGETNPPTRRPCAALSPEDLTESEWFYLMCVSFSFAPGVG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60446g00001 121 PANTHER TRANSCRIPTION FACTOR TT8 8 121 - -
Stsc60446g00001 121 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 120 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60446g00001 Stsc-Chr60446 4044 4966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60446g00001 2 121 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 69.919 1.97e-57 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60446g00001 - - adu:107475781 243.432