Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60445g00028 ATGGGTGAACAATTGGGGCAGCTCAAAATCATAGTGGTGCAAGGGAAGAGGTTGGTGATCCGTGATTTCAAGAGCAGTGATCCTTATGTTGTCCTCAAACTAGGCAATCAGACAGCAAAGACCAAAGTCATTAACAGCTGCTTGAATCCTGTTTGGAATGAAGAGCTCAATTTCACCCTCACTCAACCTTTGGGAGTTCTGAACTTGGAAGTGTTTGATAAAGATCTTTTGAAATCTGATGACAAGATGGGAAATGCATTCCTGAACCTTCAACCATTAGTCTCTGCAGCTAGATTAAGAGACATCTTAGGAGTCTCATCAGGTGAAACAACACTAAGGAAGGTCATACCGGACAATGAAAACTGCCTGGTCCGCGAAAGCAGCATCAACTGCGTTAATGGCGAGGTTGTGCAGAATGTTTGGTTAAGGCTTCGCGGGGTGGAGTCCGGCGAGGTAGAATTGACCATCAAGTTGGTAAAAAATGTTGCCAAATAA 495 0.4404 MGEQLGQLKIIVVQGKRLVIRDFKSSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTQPLGVLNLEVFDKDLLKSDDKMGNAFLNLQPLVSAARLRDILGVSSGETTLRKVIPDNENCLVRESSINCVNGEVVQNVWLRLRGVESGEVELTIKLVKNVAK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60445g00028 164 Pfam C2 domain 6 98 IPR000008 -
Stsc60445g00028 164 CDD C2_ArfGAP 5 150 - -
Stsc60445g00028 164 PRINTS C2 domain signature 67 75 IPR000008 -
Stsc60445g00028 164 PRINTS C2 domain signature 22 34 IPR000008 -
Stsc60445g00028 164 PRINTS C2 domain signature 46 59 IPR000008 -
Stsc60445g00028 164 SMART C2_3c 7 102 IPR000008 -
Stsc60445g00028 164 Gene3D C2 domain 4 164 IPR035892 -
Stsc60445g00028 164 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Stsc60445g00028 164 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 160 IPR044562 -
Stsc60445g00028 164 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 159 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60445g00028 Stsc-Chr60445 175208 177897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60445g00028 1 157 C2H2 Transcription Factor Family AT4G21160 42.138 2.93e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60445g00028 - - gmx:100779624 301.982