Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60445g00024 ATGTCTTCTGCAACAACATTAACACAATCATCCTTGCATAGCACTAGTAGTATGCACCAATCATCATCATCAGATGAAGGTGCTAAATCTGCCATGGACATGTCCCAAATCTTCAACAACTACTATGGAAATGGAATCATCACAAGTAGTACTACTAGTGTTAGTGAGATAGTAGAGGTAGAAGAAGAAGAAGAAAACATGATCAAATCATCATCATCATCAAATAATCATCAAGGTTGTAGGAGTACTATGTCAAGAATTAGTGAAGGGAGGAGCAGTGAAATAATGGAGGAAGATATTGTTTATGTAGCAGTTGGAAAGAGTGAGACAAGCATGGAAGCTCTGACATGGACTCTGAAGAACATGGCTACAACCTCATCTACCATGCTTTATCTCATACATGTTTTTCCTGAGATCAAACACATTCCAAATCCATCTGTTGTTTCTGCAATGACAGTGGGAATGGGAATGATCCCAAAGAGCCAAGTGAGTGCAGAGCAAGTTGAGAGCTTCATGGCCCAAGAAAGAGCCAAGAGGAGAGACCTCCTTCACAAGTTCCTCCAAACATGTTCTGCTTGCAAGGTTAAGGTGGACACCATTCTCATTGAAAGTGATTTCGTTGCAAAGGCTATATTAGACTTGATCCCCATTCTTCAAATCACAAAACTAGTCCTTGGACTCAACAAATCCCAACTAAGAAAATTGAGATCAAGGAAAGGGAATGGCATAGCAGATCAAGTACTTGAGGGTGCACCAGAAAGCTGCAAGGTGAGAATTGTGTGTGAAGGAAAGGAAGTTACTGAAAAGATAACTGGTTTAGGGTCACCCTCTCCTTCTCCTCGTGCCACTTCCATGTCCCATAACAAAGAAAAAAAAGACCCTCTCAAAAAAGATTCTGTTTCATGTAATTGTTTTCACTTTTAA 924 0.4015 MSSATTLTQSSLHSTSSMHQSSSSDEGAKSAMDMSQIFNNYYGNGIITSSTTSVSEIVEVEEEEENMIKSSSSSNNHQGCRSTMSRISEGRSSEIMEEDIVYVAVGKSETSMEALTWTLKNMATTSSTMLYLIHVFPEIKHIPNPSVVSAMTVGMGMIPKSQVSAEQVESFMAQERAKRRDLLHKFLQTCSACKVKVDTILIESDFVAKAILDLIPILQITKLVLGLNKSQLRKLRSRKGNGIADQVLEGAPESCKVRIVCEGKEVTEKITGLGSPSPSPRATSMSHNKEKKDPLKKDSVSCNCFHF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60445g00024 307 MobiDBLite consensus disorder prediction 69 90 - -
Stsc60445g00024 307 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 102 252 - -
Stsc60445g00024 307 MobiDBLite consensus disorder prediction 66 90 - -
Stsc60445g00024 307 Gene3D HUPs 99 261 IPR014729 -
Stsc60445g00024 307 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 49 306 - -
Stsc60445g00024 307 MobiDBLite consensus disorder prediction 270 298 - -
Stsc60445g00024 307 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60445g00024 Stsc-Chr60445 149583 152153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60445g00024 89 269 U-box Gene Family AT5G65500 30.319 3.44e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60445g00024 - - pcin:129286716 273.478