Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60445g00023 ATGAAGAAGAATAGAAGAAACCAAGTGTTTTATCACAACAAAAGATGCACCATCACAAGTGATTATAATGATGATGATGATGAAATTGAAGAAACTTCAGAGGATTTGTTTGAGATCAGTCTCAATAATCAAGAAGAAGAAGAAGATTTGTTCTCTATAGATATTCAGAATGTGAGAGATGTTGTTGTTCATGTTCATGTGGGAGTGGGCCATAGTGGAGAATCAAGCATGGAAGCACTTTTATGGGCTTTGAAGCATTATGTCACACCATTTACCATTCTCCATTTCATTCATGTTCTTCCTCATAAAAGCCTCATTCCAACCCCATTTGGAAAAATTCCAAGGAAACTTGTGAATGAGCAGTGTGTTGACACTTACTTGACACAAGAGAAAAGCAAGAGGAAAGTGCTTCTTCAAAAGTTCATTGACTTGTGCAATCTTAAAAAGGTGAAGGTGGAGATGTTGCTTATTGAGGGTGACAATGTTGCCAAAGCCATAGTGGAGTTTGTTAACAATCTTCATATAAAGAAATTGGTAATTGGAACAAGCAAGTATCATTTAAGGAGGAGACAAGGGATAGCAAGTAAGGTGCTGAAGAATTTAGCAGAGAAATGTGATGTTAAAATCATTTGTGAAGGAGAGGAAGTAACTGATCAGATTATTGGAATTGAATGCAGTTCATCACCACCCTCTAACAGAGTTTCACAAACAGAAGATGAATCCATTGAATCTGTTCCTCTTATGCATCTCATGAAAAATTCTATGAGGGCATTTAGACCAAGATTTCAATAA 792 0.3624 MKKNRRNQVFYHNKRCTITSDYNDDDDEIEETSEDLFEISLNNQEEEEDLFSIDIQNVRDVVVHVHVGVGHSGESSMEALLWALKHYVTPFTILHFIHVLPHKSLIPTPFGKIPRKLVNEQCVDTYLTQEKSKRKVLLQKFIDLCNLKKVKVEMLLIEGDNVAKAIVEFVNNLHIKKLVIGTSKYHLRRRQGIASKVLKNLAEKCDVKIICEGEEVTDQIIGIECSSSPPSNRVSQTEDESIESVPLMHLMKNSMRAFRPRFQ 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60445g00023 263 Pfam Universal stress protein family 67 208 IPR006016 -
Stsc60445g00023 263 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 22 240 - -
Stsc60445g00023 263 Gene3D HUPs 53 219 IPR014729 -
Stsc60445g00023 263 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 200 - -
Stsc60445g00023 263 Coils Coil 29 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60445g00023 Stsc-Chr60445 146767 148696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60445g00023 61 244 Plant U-box Gene Family AT5G57035 30.159 3.17e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60445g00023 - - aprc:113852199 243.432