Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60444g00014 ATGTCGGCAGCGGCGGCGTGCGCAACCGCTGCAGATGCGGCTCGAGCTGCCGTGTGCCGTGACGGCGAAGCCGCACCACACCTAAAACTCATCTCTATATTCACCATCTTCGCCACCAGCATGGTGGGGATGTCATCCCCAGTACTAGTGGCACGATTCTTTAAAACTAATCAATCTCTCTACAACAACGCTCTTGTTGTTATTAAGTGCTTCGCAGCCGGAGTCATCCTGGCCACGTCATTAGTCCACGTGATGCCGGATGCGTTCGACGCGCTAGCTGACTGCCACGTGGCAACCAAGCACCCGTGGAAGGATTTTCCTTTCGCGGGGCTTGTGACATTAATTGGTACAATCTTGGCACTCTTGGTTGACGTGGCAGCCAGCTCGCACGTGGAGCATCACGTGAGCTATAAGGCTTTGGAGGGAGTAGAAGAGGAGAAGGAGTTAGTTGGGGACGGTTACGGCGGTTGCGATGATGACGTGGAGAGGGTGGTTAGGGTTGAAGAGGAAGTGGCGAGGTTGAAACAGAGATTGGTGTCACGAGTGTTGGAAATTGGGATAATATTTCATTCGGTGATAATTGGAGTGACGATGGGAATGTCTCAGAATGTTTGCACTATAAGGCCACTCGTTGCTGCTTTGGCCTTTCATCAAATCTTTGAAGGAATGGGTCTTGGTGGTTGTGTTGCTCAGGCAGGGTTCAGGTTTGGAACAATGGCATACATGTGCTTGATGTTCTCAGTGACAACACCAATGGGAATAATATTAGGGATGATTCTGTTCTCAGCCACTGGCTACGATGATAGTAACCCTAATGCATTGATCATGGAAGGCTTACTTGGTTCACTTTCTTCTGGGATTCTAATCTACATGGCTCTTGTTGATCTCATTGCACTTGATTTCTTTCACAACAAGCTTATGACCTCAAATCTTGGGTTGAAAAAAGTCTCTTTTCTTGCATTAACTCTTGGCTCTGCTTCAATGTCTCTTCTTGCCCTTTGGGCTTAA 1008 0.4851 MSAAAACATAADAARAAVCRDGEAAPHLKLISIFTIFATSMVGMSSPVLVARFFKTNQSLYNNALVVIKCFAAGVILATSLVHVMPDAFDALADCHVATKHPWKDFPFAGLVTLIGTILALLVDVAASSHVEHHVSYKALEGVEEEKELVGDGYGGCDDDVERVVRVEEEVARLKQRLVSRVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFRFGTMAYMCLMFSVTTPMGIILGMILFSATGYDDSNPNALIMEGLLGSLSSGILIYMALVDLIALDFFHNKLMTSNLGLKKVSFLALTLGSASMSLLALWA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60444g00014 335 Pfam ZIP Zinc transporter 28 332 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc60444g00014 335 Coils Coil 157 177 - -
Stsc60444g00014 335 PANTHER ZINC/IRON TRANSPORTER 27 329 - -
Stsc60444g00014 335 NCBIfam ZIP zinc/iron transport family 15 335 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60444g00014 Stsc-Chr60444 128218 130122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60444g00014 5 335 Inorganic Solute Cotransporters AT2G30080 64.943 6.75e-161 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60444g00014 K14709 - qsa:O6P43_020371 460.685