Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60443g00033 ATGGGGGAGAAGCCCCACTTGTCTTTGTCCAAGCTCGCCAAGATTCATGGTCCTATCATGAGTATGCAGCTTGGACAAAAGACATCAATAGTAGTCTCTTCCGTGGAAATGGCGAAAGAGGTACTTCTTACCCATGACAACCTCTTGTCAAACCGGCCTATTCCGCAATCCGTGTCGGTTCTCAACCATGAAAACTACAGCTTCGCCTTCATTCCCATTTCCGCTCTTTGGCGCGAAATGAGAAAGTTATGCAACACAGAGTTACTATCCCACAAGAATCTTGATGATAGCCAACATGTTAGGCGTCACAAAATGCAAGAACTCCTCAGTGATGTCCATCGTAGCAGCCAAATCGGTGAAGCGATAGATATTGGAACACTAGGGTTCAAGGCTACCTTGAATCTGTTGTCAAACACCATTTTCTCCATAGATTTGGTTGAATCTACAGATGCAGCGGGAGAGTTCAAGGATTTGGTTACTGACATCACGAAGCTTGTTGGAACACCAAACTTGGCTGATTTCTTCCCCGTGTTGAAGACAATTGACCCACAAGGCATCAACCGAAGACAGGCTAAGAATGTAAGAAAGGTTCTTGATATCTTTGACCGTTTGATTAACCAACGGTTGAAGCTGAGAGAAGGAAATGCTTTTGATAGCAAAAATGACATGTTGGATGCCCTTCTCACCATTTCTAAGGACAACAAGATGATTGATAAAACAGTCATCGAACATTTATTCCACGATATATTCGTTGCCGGAACAGACACGACAGTATCAACCTTAGAATGGGCGATGACTGAGTTAGTTCGCAACCCACAAGTTATGGAAAATGCTAAAAAGGAATTAGGCGAAATAGTTGGCAACAATGACGTCCCTATTGAGGAGTCAGATATTTCCAAACTCCCATACCTACAAGCAGTAATAAAAGAGACGCTACGTTTGCACCCTCCAGTTCCATTCTTGCTGCCAAGAAAAGCTGAGAGTGACGTGGACATCGTTGGCTACACCATCCCAAAAGATGCTGAGATTATGGTTAATGTGTGGAACATTGGAAGGGATCCAACGCTGTGGGAAAATCCAACACTGTTTTCTCCGGAGAGGTTCATAGGTTCCGATATTGACGTTAAAGGAAGGAACTTTGAACTGGCTCCGTTTGGTGGTGGAAGAAGAATATGCCCTGGATTACAATTGGCTAATAGAATGTTGTACTTGATGTTGGGTTCGTTGATCAACTCCTTTGATTGGAAGCTTGAAGATGGAATGAGATCGGATCATATAGACATGACTGAGAAATTTGGAATTACTCTACAAAAAGCTAAACCGCTTAAAGTGTTTCCAATCAAGATAACCAACTAA 1356 0.4285 MGEKPHLSLSKLAKIHGPIMSMQLGQKTSIVVSSVEMAKEVLLTHDNLLSNRPIPQSVSVLNHENYSFAFIPISALWREMRKLCNTELLSHKNLDDSQHVRRHKMQELLSDVHRSSQIGEAIDIGTLGFKATLNLLSNTIFSIDLVESTDAAGEFKDLVTDITKLVGTPNLADFFPVLKTIDPQGINRRQAKNVRKVLDIFDRLINQRLKLREGNAFDSKNDMLDALLTISKDNKMIDKTVIEHLFHDIFVAGTDTTVSTLEWAMTELVRNPQVMENAKKELGEIVGNNDVPIEESDISKLPYLQAVIKETLRLHPPVPFLLPRKAESDVDIVGYTIPKDAEIMVNVWNIGRDPTLWENPTLFSPERFIGSDIDVKGRNFELAPFGGGRRICPGLQLANRMLYLMLGSLINSFDWKLEDGMRSDHIDMTEKFGITLQKAKPLKVFPIKITN 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60443g00033 451 Pfam Cytochrome P450 3 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 PRINTS E-class P450 group I signature 241 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 PRINTS E-class P450 group I signature 37 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 PRINTS E-class P450 group I signature 305 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 PRINTS E-class P450 group I signature 392 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 PRINTS E-class P450 group I signature 13 32 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 PRINTS E-class P450 group I signature 346 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 PRINTS E-class P450 group I signature 382 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 PRINTS E-class P450 group I signature 261 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 448 - -
Stsc60443g00033 451 SUPERFAMILY Cytochrome P450 3 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 Gene3D Cytochrome P450 1 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 FunFam Cytochrome P450 76C4 1 445 - -
Stsc60443g00033 451 PRINTS P450 superfamily signature 252 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 PRINTS P450 superfamily signature 383 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 PRINTS P450 superfamily signature 306 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60443g00033 451 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 385 394 IPR017972 GO:0005506|GO:0016705
Stsc60443g00033 451 CDD CYP76-like 13 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60443g00033 Stsc-Chr60443 203716 206131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60443g00033 1 448 Cytochrome P450 AT2G45550 46.813 8.55e-148 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60443g00033 - - gmx:100807367 674.085