Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60443g00018 ATGAATGGTGGTGCAAGTTTTGATGCTGAGGCTGAGGCAGAGTGCTCTGAATTTGTGGAAGTTGATCCAAGTGGAAGATATGGAAGGTATAATGAAATTCTTGGCAAAGGAGCTTCCAAGACAGTTTATAGAGCATTTGATGAATATGAAGGGATAGAAGTTGCATGGAACCAAGTGAAGCTTTACGACTTTCTGCAGAATCCGGAAGACCTTGAGAGATTATACTGTGAAATTCACCTTCTTAAGACATTGAAACACAAGAACATCATGAAGTTCTACACTTCCTGGGTTGATACTAGCAACAGACATATTAATTTCGTCACTGAGATGTTCACCTCTGGGACTCTAAGACAGTACAGGCTTAAACACAGAAGGGTTAACATCAGAGCTGTTAAGCATTGGTGCAGGCAGGTTTTAGAAGGGCTCCTCTATCTGCACAGCCATGACCCTCCTGTGATCCATAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGGGAAGTTAAAATTGGGGATCTCGGCCTTGCTGCAATTCTTCGCAAATCTAATGCTGCTCACTGTGTTGGCACACCTGAGTTTATGGCTCCTGAAGTATATGAAGAGGATTACAATGAATTGGTTGACATATACTCATTTGGAATGTGCCTCTTAGAGATGATTACCTTTGAATATCCTTATAGTGAATGCAACCATCCTGCTCAAATTTACAAGAAAGTTTCCTCTGGGAAGATGCCAGAGTCTCTTTACAAAGTGAATGATCCCGAGGTACGACAATTCGTAGAGAAATGCTTAGCAACTGTGTCCCTCAGACTTTCAGCAAAGGAACTATTGGAGGACCCTTTTCTCCAACTTGATGATTATGGATATGACTTGAAATCATTGCAATATCAAAGAGACTGCTATGAAGTAGCCCCAATAATTAGACAGTCTCTTAATGGAATTCATAGCAGCAACACCACTTTAATGAGTGGCTCCACTGATAATCTTGGTGGTTATGGACCTGTATCAGAATTGGATTTTGAAACAAGTGAAATTGATCTCTTTGATTGCGAAGAGGACGATAAATTAGCTGAATTTGACGCCTCGATTAAAGGTAGGAGAAGAGAAGATGATGGCATCTTTCTGAGAATCAGAATAGCAGATAAAGAAGGTCGAGTTCGAAACATCTATTTCCCATTTGACACCGAGACTGATACTGCATTGAGCGTTGCTACTGAAATGATAGCTGAACTTGACATCACTGATCAAGATAACGGATGCGCAGCAGTTCACGGCAGATTCGAGGAGATTACTTATCAAGTTGAAGGATCTGAAAGCAGTGCTACAGAAGGTGCACAAGATCCATCACGCCAACCCAGTGGCATTCATTATGCCGATATCTGGGCGCAGCGGGATGAACCAGACTTGTGTTCTGAAGAGTTAAAAGACATACACTGTGAAGACAAGTCTAATGAGGCATCAAATCAATCAACCATCAAGGATGATGGAAGAACTATTAATGTGGATGATCAAAGGCATCTCAATGCTAGAAAGCCGCCTTCTTTTCCTTTGTCAGATTGTGTTCTTATGGACTATGAGAATGAAATTAGACAAGAACTGAGATGGCTAAAAGCAAAGTACCAGATGCAGCTAAGAGAGCTTAGAGACCAGCAACTTGGGAGTAAACTAAAGTTAGCTAGCACATCCCCTGACACTGAAAAATTGGAGCTATCAGCTACATCCCACTTAAAGTTACAGGACAAGAAACCACTGCTGAGATCTTTAGTGTGTGGTAACAATTTTCTTGTTGATGCTGAGAAGTGCACAAGTTTGGCTGATCAAATGGTTCAAAATGGTGAGGAGACAAGTGAGTCTAACAGTCCAGAACAAATAGTCACAGCCAAGGATTTCTTTGCTGGAGCTTTGCTTCCACAGTCTCTTTATAGGGCCACTTCTCTTCCTGTTGATGCAGTAGATGTCTAG 1971 0.4145 MNGGASFDAEAEAECSEFVEVDPSGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTSNRHINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQVLEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAAHCVGTPEFMAPEVYEEDYNELVDIYSFGMCLLEMITFEYPYSECNHPAQIYKKVSSGKMPESLYKVNDPEVRQFVEKCLATVSLRLSAKELLEDPFLQLDDYGYDLKSLQYQRDCYEVAPIIRQSLNGIHSSNTTLMSGSTDNLGGYGPVSELDFETSEIDLFDCEEDDKLAEFDASIKGRRREDDGIFLRIRIADKEGRVRNIYFPFDTETDTALSVATEMIAELDITDQDNGCAAVHGRFEEITYQVEGSESSATEGAQDPSRQPSGIHYADIWAQRDEPDLCSEELKDIHCEDKSNEASNQSTIKDDGRTINVDDQRHLNARKPPSFPLSDCVLMDYENEIRQELRWLKAKYQMQLRELRDQQLGSKLKLASTSPDTEKLELSATSHLKLQDKKPLLRSLVCGNNFLVDAEKCTSLADQMVQNGEETSESNSPEQIVTAKDFFAGALLPQSLYRATSLPVDAVDV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60443g00018 656 ProSiteProfiles Protein kinase domain profile. 28 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60443g00018 656 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60443g00018 656 CDD STKc_WNK 26 285 - -
Stsc60443g00018 656 Coils Coil 533 553 - -
Stsc60443g00018 656 SUPERFAMILY Protein kinase-like (PK-like) 31 286 IPR011009 -
Stsc60443g00018 656 SMART serkin_6 28 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60443g00018 656 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 442 - -
Stsc60443g00018 656 FunFam Probable serine/threonine-protein kinase WNK1 13 109 - -
Stsc60443g00018 656 Gene3D Phosphorylase Kinase; domain 1 11 109 - -
Stsc60443g00018 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Stsc60443g00018 656 FunFam probable serine/threonine-protein kinase WNK9 111 290 - -
Stsc60443g00018 656 Gene3D Transferase(Phosphotransferase) domain 1 111 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60443g00018 Stsc-Chr60443 96826 99920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60443g00018 1 568 MAP Kinase Kinase Kinase AT3G22420 51.954 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc60443g00018 Pkinase 5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60443g00018 K08867 - gmx:100272200 881.322