Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60442g00006 ATGGAACATAAAAAATCATGTGTGTTGATTGTGTGGAAAGAGTTCAAGCCACACATTCTAATGTTCTTGGCCCAGGTGGGTTGTGCCTTGGTATATTTCATCACTGAAGCTTCCTTCAACCATGGGATGAGTCCTTTTCTGTATGTAACATATCGCTATTTTGTGGCTGCTCTTTTCATCTTCCCTTTTGCATATTTTCTCGAGAGAAAACAAAGACCAAAGCTCACGTTTGCTCTGTTCATGGAAATTTTTGTGCTTTCCTTGGTCGGGATTAGTGCGCCCATAAACATGTACTTTGCAAGCTTGCAGTACACATCTCCAACCCTAGTAGCTTCAATGTTCAACATAGTGGCCTCCCTGACCTTCATTATTGCTGTAGCACTGAGGTATGAAGCTCTTGATCTTGGAGATGCACATGGAATAGGAAAAGTTGTAGGGACATTGATATCGTTAGGAGGAGTAATGACGATGACGCTGTACAAAGGACCAAAGGTGAAGAATTTGTGGGGTCCACTAATCCATATTCAAGGGAGAAGTGGTGGAAGCCAAGAGAATTGGTTGAAGGGTTCAGTTCTTGCGGTTACAAGTTGTGTTTCATTATCTGTCTGGTATATTATGCAGGCATCGACTTTGAAAAGGTACCCAGCTCAACTATCCCTAACTTCATGGATGTGCTTTATTGGAGCAATGCAATCAGCTATTTTCACAGCAATTGTAGAACATAATCACCCTTCAACATGGCTCATAGGCTTCAACATTGATTTGTGGTCCACATTATATGGTGGAATTGTGGTGTCTGGTTTGGTAATATATGTTCAATTATGGTGCACTGAGAAAAAAGGGCCAGTCTTTGTCACAATGACTACCCCACTTTGTACCATTGTGGTGGCTATTCTAGCATACTTCGTCTTTGGCGAAAAACTTTATCTTGGCAGCATCATAGGGGCATGTTTTGTCATCGTTGGTCTGTATTTGCTGTTGTGGGGTAAAGAAGCAGATGACAAACAAGTTGACACTACTATCATCACAAAAGATGCATCAACAAAGTGCAACGTTGAAGACCCATTAGAATGTAGAATTTGA 1083 0.4127 MEHKKSCVLIVWKEFKPHILMFLAQVGCALVYFITEASFNHGMSPFLYVTYRYFVAALFIFPFAYFLERKQRPKLTFALFMEIFVLSLVGISAPINMYFASLQYTSPTLVASMFNIVASLTFIIAVALRYEALDLGDAHGIGKVVGTLISLGGVMTMTLYKGPKVKNLWGPLIHIQGRSGGSQENWLKGSVLAVTSCVSLSVWYIMQASTLKRYPAQLSLTSWMCFIGAMQSAIFTAIVEHNHPSTWLIGFNIDLWSTLYGGIVVSGLVIYVQLWCTEKKGPVFVTMTTPLCTIVVAILAYFVFGEKLYLGSIIGACFVIVGLYLLLWGKEADDKQVDTTIITKDASTKCNVEDPLECRI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60442g00006 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Stsc60442g00006 360 PANTHER WAT1-RELATED PROTEIN 17 334 IPR030184 GO:0016020|GO:0022857
Stsc60442g00006 360 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020
Stsc60442g00006 360 Pfam EamA-like transporter family 17 145 IPR000620 GO:0016020
Stsc60442g00006 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60442g00006 Stsc-Chr60442 25779 29488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60442g00006 1 354 Nodulin-like Gene Family AT5G07050 39.835 9.75e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60442g00006 - - gmx:100527877 509.99