Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60442g00003 ATGGATTTCGATTCCCTCGACGATTTCTTCGATTTCGATGATTTCATCCGCCGTTCTCCCCCTCCCTCCTCCGATTTCCTATGGTCCAATCCAAGTGCGAGCTCTGAAATTGGCTTTTCAGCAGGAGGTAGTGCTGGTGGTAGTAGTGATGTCTGCCCAAAGAAAACCAGAAAGAGGGGACATGCTAGTTCATGTTGCAAGGAAGGGACAAAGGCTGGCCGTGAAAAGTTGCGGAGGGAGAGACTCAATGAAAGGCAAGCATGCTTCTATATACTGAATTGGTTAATCTCATTCCAGAGTCAGTCTTTAACAAGCTGCATTAAGCTGATGTTCTGTGACTTGAGTGCTGTGTTGGAACCTGGGAGACCTGCGAAAACTGATAAAATGGCCATACTTGATGATGCTATTAGAGTTTTGAAACAACTTAAAACTGAAGCTGAGGAACTCAAAGAAACGAATGCAAAATTGTTAGAAGAAATAAAATGTTCGAAGGCAGAGAAAAATGAACTCCGAGAAGAGAAACTTGTTCTGAAAGCAGATAAAGAAAGGATTGAGAGACAGTTGAAAGATTTGCCCGTTCAACCTGCAGGGTATATGCCTCCCAATCTAGCTCCTTTCCAAGCAGGGGTCAACAAAGTCGCTGTTTATCCGAACTATGGTTATATGCCAATGTGGCATTATCTTCCTCCATCTACCCGTGATACATCCCATGATCACGAGCTTAGGCCTCCTGCTGCATAA 741 0.4413 MDFDSLDDFFDFDDFIRRSPPPSSDFLWSNPSASSEIGFSAGGSAGGSSDVCPKKTRKRGHASSCCKEGTKAGREKLRRERLNERQACFYILNWLISFQSQSLTSCIKLMFCDLSAVLEPGRPAKTDKMAILDDAIRVLKQLKTEAEELKETNAKLLEEIKCSKAEKNELREEKLVLKADKERIERQLKDLPVQPAGYMPPNLAPFQAGVNKVAVYPNYGYMPMWHYLPPSTRDTSHDHELRPPAA 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60442g00003 246 Coils Coil 132 187 - -
Stsc60442g00003 246 MobiDBLite consensus disorder prediction 39 63 - -
Stsc60442g00003 246 Gene3D - 70 191 IPR036638 GO:0046983
Stsc60442g00003 246 CDD bHLH_AtILR3_like 71 171 - -
Stsc60442g00003 246 PANTHER BHLH TRANSCRIPTION FACTOR 18 246 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Stsc60442g00003 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 156 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60442g00003 Stsc-Chr60442 15691 18046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60442g00003 43 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 55.869 8.72e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60442g00003 - - gmx:100789655 271.552