Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60439g00043 ATGTTGGTGTATGAATACATGGAAAATAGAGGCCTTGATTCCATTCTGTTTGACAAATCAAAGAGATCTTTGCTTGATTGGGAAAGAAGATTCAATATTATATATGGAATAGCTAGAGGACTTCTTTATTTGCATCAAGATTCAAGATTTCGAATTATCCATAGAGATCTCAAAACAAGTAACATATTACTGGATAATGAAATGAATCCAAAGATATCAGACTTTGGAATGGCTAGAATTTTTGACAAAGATCAAACACAAGCACAGACACTAAGAATTGTTGGAACATATGGGTATATGTCTCCCGAATATGCTATGGATGGAAGCTTCTCGATAAAATCAGATGTTTTTAGTTTTGGAGTAATGGTATTGGAGATCATAACCGGAAAGAAAAATAGAGGGTTTTACAGTGATAATGAAGAATTGAATCTTTTAGGAAATGTATGGAGGCATTGGCATGAAGGAACTGCATTGTCACTGATAGATTCATCTATTGGAGATTCATACACAGAGGCTGAAGTTGTAAAATGCATACATATTGGACTTTTATGTGTTCAAGAACGTGTAGAAGATAGACCAACAATGTCTTCAGTGGTTTTAATGTTGAGTAGTGAAGCTCCATCAATGCCAAACCCTAAAAATCCTGGATTTATTGCAAGAAAAACTCTTCAAGAGACTGATTCATCTTCAAGTAAACTAGATGAAACATGGAGTGTGAATCAAGTCACAATCACAATGTTTGATGCTAGGTAG 753 0.3453 MLVYEYMENRGLDSILFDKSKRSLLDWERRFNIIYGIARGLLYLHQDSRFRIIHRDLKTSNILLDNEMNPKISDFGMARIFDKDQTQAQTLRIVGTYGYMSPEYAMDGSFSIKSDVFSFGVMVLEIITGKKNRGFYSDNEELNLLGNVWRHWHEGTALSLIDSSIGDSYTEAEVVKCIHIGLLCVQERVEDRPTMSSVVLMLSSEAPSMPNPKNPGFIARKTLQETDSSSSKLDETWSVNQVTITMFDAR 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60439g00043 250 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 248 - -
Stsc60439g00043 250 Pfam Protein tyrosine and serine/threonine kinase 1 200 IPR001245 GO:0004672|GO:0006468
Stsc60439g00043 250 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60439g00043 250 Gene3D Transferase(Phosphotransferase) domain 1 7 213 - -
Stsc60439g00043 250 SUPERFAMILY Protein kinase-like (PK-like) 1 225 IPR011009 -
Stsc60439g00043 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Stsc60439g00043 250 Pfam Domain of unknown function (DUF3403) 204 250 IPR021820 GO:0004674
Stsc60439g00043 250 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 7 210 - -
Stsc60439g00043 250 SMART serkin_6 2 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60439g00043 Stsc-Chr60439 170435 171459 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60439g00043 1 250 Receptor kinase-like Gene Family AT4G23150 55.906 4.84e-98 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc60439g00043 PK_Tyr_Ser-Thr 3.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60439g00043 - - aip:107621495 405.216