Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60439g00037 ATGACCAAAGCCTCTGTCATATGGGTTGCCAACAGAAACCAACCAATCAATGATTCTTCATCTTCTGGCTTGCTCAAGATATCAAAGGATGGAAATCTTGTTTTGATGAATTCAAATAATATGGTCCTTTGGTCAACAACTGCCTCCAATATTTCATCCAACGCAGTAGCTATGCTTCTAGACACCGGCAACCTTGTTTTGCAAGAAAACTCCACAGGAAGGATCCTATGGCAGAGTTTCCAACACCCCACAAACGGTTACTTGCAGGGAATGGAACTCAACACCGATAACATTAACGGGGAGAGAATAAAGCTCACATCCTGGAGAAGCCCTCAGGATCCATCCATTGGAGAATTTTCAGCTAGTCTTGAGCGTTTGAATATCCCAGAAGTAATGATATGGAGAGGGAGCCAACCATACTGGCGTAGTGGTCCATGGAATGGTCAAAAGTTTCTGGGGATATCTGACATGAGAAGCAACTTTCTTTCAGGGTTTTACTTAGGTGAGGAAAACACGGATAACGGAACTAGTAATTTCTATCTTGCTTACAACCTCAGTAGCAATCCTGATACTGAATACTACTACATGTTGAGTGCTGATGGAAACCTATCTGAAATGTATTGGGATATTGAAAAGAGAGACTGGCTTATCTCCTGGACATCGAAAACATCAGACTGTGATGTGTATGGAAAGTGTGGAGAGTTTGGAATTTGTGATGCCGCAAGCTCTCCAATTTGCAGCTGTTTGAGAGGGTATATGCCAAGGAATCCTGGGGAATGGAATAAACAGAACTGGAGCAGCGGTTGTGTTAGGAAAGAACCTTTGCAGTGTGAGAGTAAGAGAGTCCCAAATAATAAAGAAGATGGATTTGTGAAGGTGCAGAATGCAAAGGTGCCAGCCTCTATCATGTGGTCTACTACGAATATTGGGAATGATTGCGGAGGTGATTGCTTGGGGAACTGCTCCTGCATAGCATATGCATATGATGCTGGCACTGGTTGTATGTTTTGGACAGCGAACCTAACTGACATCCAAAGCTTCTCGTTGGGAGGAATCAATCTTTACATTCGAGTTCCCAATTCAGAGCTTGGTGGAGACAAGAAAAATGACACAGTGATCATTGCAGTTCCAGTCATAGTAGGAATCGCTATTATTCTCACTTGTGCTTATATCCTCTGGAAAAGGATTCAAATCAGAGAGAGAGTGAAAAACAAACCAAGGGTAAATGACAATGACCTGGGAAAAGTCCCAGAGCTTTTCCAATTTGAGTTTGAAAGACTTGTTGCTGCAACAAATAACTTCAATCTATCTAATAAGCTAGGAGAAGGAGGTTATGGACCAGTATATAAGGGAACATTATTGGAAGATGGACAGGAAATAGCAGTTAAAAGGCTTTCAAGATCATCCGGGCAAGGATATGAAGAATTTATGAATGAGATTATGGTTATATCAAAGCTTCAACATCGAAATCTTGTCAGACTTCTTGGATGTTGTATAGAAAGAGATGAGAAGATTTTGATCTATGAGTACATGCCAAACAAAAGTCTAGATGCATATATATTTGATCAATCAGGACGGATATTGAATTGGGAAGAACGTTTTAGTATAATCGAAGGAATAGCCCGGGGCTTGCTTTACCTTCACAGAGATTCTAGACTGAGAATTATACATAGAGATTTGAAGATGAGTAACATACTACTTGATGAAGAGCTAAATCCAAAAATTGCAGATTTTGGCATAGCAAAGATTTTTACCCGGACTCAAGATATGGTCAATACTAGGAGGGTTGTTGGAACATACGGTTACATGTCACCAGAATACGTCATACAAGGAATATTTTCAGAGAAGTCTGATGTATTTAGTTTTGGTGTTTTATTGTTGGAGATCGTGAGTAAAAGAAAAAATGCCAGCTTTTATGAAGATGCTGAGTCTTTGAGCCTTTTAGGATTCACATGGAATTTATGGAATGCTGATAACACTGCATCTCTAATAGATCCAGAAATATCAAGTTCATGCAACAGAGAAGATATTATAAGGTGCATACATATTGGTCTTCTATGTGTACAAGAGCTTGCAAGAGATAGACCTACAATGACTTCAGTAGTTTCAATGCTTAATAGTGAGACACTGAATCTTCCTGCTCCAAAACAGCCAGCATTCATCCTAAGGCAGACTATTATTGATATAGAGTCTTCTCTTACAAATGGTGGATTAGGCTCCATCAACAATGTCACCATAACAAATATCCAAGGAAGATAA 2259 0.3975 MTKASVIWVANRNQPINDSSSSGLLKISKDGNLVLMNSNNMVLWSTTASNISSNAVAMLLDTGNLVLQENSTGRILWQSFQHPTNGYLQGMELNTDNINGERIKLTSWRSPQDPSIGEFSASLERLNIPEVMIWRGSQPYWRSGPWNGQKFLGISDMRSNFLSGFYLGEENTDNGTSNFYLAYNLSSNPDTEYYYMLSADGNLSEMYWDIEKRDWLISWTSKTSDCDVYGKCGEFGICDAASSPICSCLRGYMPRNPGEWNKQNWSSGCVRKEPLQCESKRVPNNKEDGFVKVQNAKVPASIMWSTTNIGNDCGGDCLGNCSCIAYAYDAGTGCMFWTANLTDIQSFSLGGINLYIRVPNSELGGDKKNDTVIIAVPVIVGIAIILTCAYILWKRIQIRERVKNKPRVNDNDLGKVPELFQFEFERLVAATNNFNLSNKLGEGGYGPVYKGTLLEDGQEIAVKRLSRSSGQGYEEFMNEIMVISKLQHRNLVRLLGCCIERDEKILIYEYMPNKSLDAYIFDQSGRILNWEERFSIIEGIARGLLYLHRDSRLRIIHRDLKMSNILLDEELNPKIADFGIAKIFTRTQDMVNTRRVVGTYGYMSPEYVIQGIFSEKSDVFSFGVLLLEIVSKRKNASFYEDAESLSLLGFTWNLWNADNTASLIDPEISSSCNREDIIRCIHIGLLCVQELARDRPTMTSVVSMLNSETLNLPAPKQPAFILRQTIIDIESSLTNGGLGSINNVTITNIQGR 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60439g00037 752 ProSiteProfiles PAN/Apple domain profile. 277 359 IPR003609 -
Stsc60439g00037 752 Pfam Domain of unknown function (DUF3403) 707 752 IPR021820 GO:0004674
Stsc60439g00037 752 Gene3D Phosphorylase Kinase; domain 1 396 510 - -
Stsc60439g00037 752 ProSiteProfiles Protein kinase domain profile. 434 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60439g00037 752 SUPERFAMILY alpha-D-mannose-specific plant lectins 4 147 IPR036426 -
Stsc60439g00037 752 PIRSF SRK 1 752 IPR024171 GO:0004674
Stsc60439g00037 752 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 398 510 - -
Stsc60439g00037 752 CDD STKc_IRAK 440 706 - -
Stsc60439g00037 752 Pfam D-mannose binding lectin 6 109 IPR001480 -
Stsc60439g00037 752 Pfam Protein tyrosine and serine/threonine kinase 435 705 IPR001245 GO:0004672|GO:0006468
Stsc60439g00037 752 SUPERFAMILY Protein kinase-like (PK-like) 418 725 IPR011009 -
Stsc60439g00037 752 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 511 713 - -
Stsc60439g00037 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Stsc60439g00037 752 ProSiteProfiles Bulb-type lectin domain profile. 1 80 IPR001480 -
Stsc60439g00037 752 SMART ntp_6 285 358 IPR003609 -
Stsc60439g00037 752 CDD B_lectin 6 83 IPR001480 -
Stsc60439g00037 752 CDD PAN_AP_plant 274 359 - -
Stsc60439g00037 752 Gene3D Transferase(Phosphotransferase) domain 1 511 713 - -
Stsc60439g00037 752 Gene3D - 2 81 IPR036426 -
Stsc60439g00037 752 Pfam PAN-like domain 284 344 IPR003609 -
Stsc60439g00037 752 Pfam S-locus glycoprotein domain 141 255 IPR000858 GO:0048544
Stsc60439g00037 752 SMART serkin_6 434 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60439g00037 752 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 5 695 - -
Stsc60439g00037 752 SMART blect_4 1 83 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60439g00037 Stsc-Chr60439 140500 143480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60439g00037 398 723 Receptor kinase-like Gene Family AT4G11480 55.723 1.33e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc60439g00037 PK_Tyr_Ser-Thr 6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60439g00037 - - ahf:112714694 1293.1