Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60439g00029 ATGAGGAAGAAGTGTGAGCTCTGCAAACGTGCTGCAAACTTGTTCTGTGAATCAGATCAAGCAAGCCTTTGTTGGGAATGTGATGCAAAGGTTCACAGTGCAAACTTTCTAGTCACAAAGCATCCAAGGATTCTTCTATGCCATGTTTGTCAATCACTAACACCTTGGCATGCCTCAGGACCCAAGTTTGTTCCCACCATGTCTCTTTGCACTGATTGTGTCACCAGAAACAATGATAGCTGCAACCAACAGAATAACGATGATGACGACGACGAGGAGGATGTAGAAAATGATGGTGTTGAGGATGAAGATGAAGATGAAGAAGAAAATCAAGTGGTTCCATGGACATCATCAACAACATCAATGCCTCCACCACCAGTTTCCTCTTCTTCAAATAGTGCAACCACTTCCACCAGGTTCTCTAATGGTGCTGAAGAAGAAGCAATCTCCAATTGA 456 0.4342 MRKKCELCKRAANLFCESDQASLCWECDAKVHSANFLVTKHPRILLCHVCQSLTPWHASGPKFVPTMSLCTDCVTRNNDSCNQQNNDDDDDEEDVENDGVEDEDEDEEENQVVPWTSSTTSMPPPPVSSSSNSATTSTRFSNGAEEEAISN 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60439g00029 151 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 142 - -
Stsc60439g00029 151 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Stsc60439g00029 151 MobiDBLite consensus disorder prediction 80 151 - -
Stsc60439g00029 151 MobiDBLite consensus disorder prediction 112 151 - -
Stsc60439g00029 151 MobiDBLite consensus disorder prediction 84 111 - -
Stsc60439g00029 151 SMART bboxneu5 1 46 IPR000315 GO:0008270
Stsc60439g00029 151 CDD Bbox1_BBX-like 4 46 - -
Stsc60439g00029 151 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60439g00029 Stsc-Chr60439 112830 113285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60439g00029 1 111 C2C2-CO-like Transcription Factor Family AT4G27310 48.649 3.88e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc60439g00029 zf-B_box 5.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60439g00029 - - gmx:100805832 143.28