Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60439g00025 ATGGGTAGCGTGGGTGCACCACCACCGCCACCGGCGGCAGCGTTTAATGAATCAGACAGATCAATGATTTGCTTTACACCAACGATGACAACCACCAACGGTGTATGGCAGCTTCAAGGTAGTAACCCTTTACGTTACGCCCTCCCTCTCTTCGTCGTCCAGTTAACCCTAGTTGTTCTCGCCACACGTCTCTTCTATTTCATCCTCAGACCCTTCCACCAACCCCGCCTCATCGCCGAGATCTTGGGTGGATTGTTGTTAGGGCCATCGGTGCTAGGCCAAATCGAGGGTTTTGCAATTAGGGTTTTCCCCATGAGAAGTGTGTTGGTGCTTGAAACAATGGCATACATTGGCCTCATATACTTCATGTTCCTCATAGGCTTAGAGATGGACATTGATATCATCAAGCGCACAGGCAAGAAGGCCATCTCCATAGCCATTGCTGGCATGATCTTCCCCTTCTTGGTGGGTTTCGCTCTTGCTCACGTCTTCCAGATCCACCACACCATCAAGGAAGTCCGTACAACCCATATCAGCTACATCATATACCTTGGTGTTGTCCTCTCTGTCACTGCATTCCCTGTGCTTGTTAGAATGCTTGCTGATCTTAAGCTTGTTAACACCGAGCTTGGCAAGCTTGCAATCTCAACTTCTTTGATTAATGACACCTGTGCTTGGGCTTTGTTAGCTGTAGGCATTGCCTTCTCACAGAGGAAAGCTCATTCCTATTCTTCTCTCTGTGTTTTCTTGTCAAGTCTTGTGTTTGTTGCTGTTTGCATTTTTGTTGTTAGGCCTATGGTGTCATGGATGATACGCAGAACCCCAGAGGGACAACCCTTCAGTGAAACACAGATATGCATTGTTCTTACTGGTGTTATAATCTCAGGGTTTATCACTGATGCACTTGGCACACATTCTGTTTTTGGTGCATTTGTTTATGGTTTGGTTATTCCAAATGGACCACTTGCTGCTTCTATCATTGACAAGCTTGAGGACTTTGTTTCTGGCCTTCTGCTGCCTCTCTTCTTTGCTATCAGTGGCCTCAAGACTAATCTCACCTTGATCAAGGGAGCTGCTAGATGGGGATTTGTCATCTTGGTTATTCCTCTTACTTTTATTGGCAAGGTCCTTGGCACTCTTTTTGTTTCTCTCCTATTCCAAATACCTGTCAGGGAAGGTGTCATTCTTGGTCTGCTTATGAATACTAAAGGCTTCATTGAAATTATTGTGCTCAATGTTGGCTGGGAACAAAAGGTGTTAGGAGATGAAGTATTTTCAATCTTGATTCTGGTAACAATTGTGATGACTACAATCATCTCACCCACAGTGGCATTGATCCACAAGCCAAGAAAAAGGAACATATTATACAAGAACAGAACAATGCAAAGCACAGCAGTAGATGCAGAGCTAAGGATCCTTGTTTGCATTCATGTCCCTAGAAATGTCCCCACCATAATCAACCTCCTGGAAGAAACCAACCCCACAATAAAATCCCCCATTACTGCAAACGTCCTCCACCTGGTTGAACTCACGGGAAGAGCCTCCGCCATGCTGGTTGTCCACGCCGACAGCATCCGCGACAGAAAATCAGGGCGCCCACTCAACAAGACACATGCACAAACAGAGCACATCATGTCAGCATTCCGCAACTTCGAAGAAAACGTGGACTGTGTCTCGGTGCAGCCATTGACTGTGGTCTCCCCGTATTCCACCATGCATGAAGACATATGCAGCATTGCAGAAGAGAAAAGAGTGTCATTCATCATCATCCCTTTCCACAAACAACAAACAGTTGCCGGAGAGATGGAAGAAACCATCCCTGCTTATAGGCTGGTCAACCACAACCTCCTCCAAGAGGCTCCCTGCTCCGTTGGGATCCTCGTGGATCGAGGCCTCAACGGATACGCAAGGTTAGCCGCCAAGCCTACCTGTCATCAGGTCACCGTCTTGTTCTTTGGAGGACCTGATGACAGAGAGGCTCTATCCTATGGCTGGAGAATGTCAAGACACCCCAGGGTTCGCCTCACCGTCATGCATTTCGTTCCTAAGAAACAAAATGTTACAGTTACTACTAATAACGAAGAAGAAGATAATGGTGGAGAGAATTATAGCAATGAGAACAAGTGTTTAGATGAAGAGATCATGTACGAGGTGGAGATGATAGCAGAACATGATGATTCTGTTGAGTACTTAGAAAGAGTTGTAGGGAATGGGGAGGAGACAATAGGGGCAATAAGGGCAATGAATAGTGTGAATGATTTGTTCATAGTTGGGAGAGGGCAAGGGACATCATCACCATTAACAGAAGGGTTGACGGATTGGAGTGAGTGTCCGGAGTTGGGTGCCATTGGGGACTTGTTAGCTTCTTCAGACTTTGAAACATCTGCATCTGTGCTTGTGGTGAACCAGTATGTTGAGGAACGTCCAGATGGAGAAGAAGTCATCATCACTGAAAAGCCATGGCTTGCAACTGATGATGACTTCTACCAAACCTTGTTGACCAGACGTACGCCAATGTCAAGAAGACATCATAGATTCGAATCATCACCAGCTATGTATTGA 2562 0.4606 MGSVGAPPPPPAAAFNESDRSMICFTPTMTTTNGVWQLQGSNPLRYALPLFVVQLTLVVLATRLFYFILRPFHQPRLIAEILGGLLLGPSVLGQIEGFAIRVFPMRSVLVLETMAYIGLIYFMFLIGLEMDIDIIKRTGKKAISIAIAGMIFPFLVGFALAHVFQIHHTIKEVRTTHISYIIYLGVVLSVTAFPVLVRMLADLKLVNTELGKLAISTSLINDTCAWALLAVGIAFSQRKAHSYSSLCVFLSSLVFVAVCIFVVRPMVSWMIRRTPEGQPFSETQICIVLTGVIISGFITDALGTHSVFGAFVYGLVIPNGPLAASIIDKLEDFVSGLLLPLFFAISGLKTNLTLIKGAARWGFVILVIPLTFIGKVLGTLFVSLLFQIPVREGVILGLLMNTKGFIEIIVLNVGWEQKVLGDEVFSILILVTIVMTTIISPTVALIHKPRKRNILYKNRTMQSTAVDAELRILVCIHVPRNVPTIINLLEETNPTIKSPITANVLHLVELTGRASAMLVVHADSIRDRKSGRPLNKTHAQTEHIMSAFRNFEENVDCVSVQPLTVVSPYSTMHEDICSIAEEKRVSFIIIPFHKQQTVAGEMEETIPAYRLVNHNLLQEAPCSVGILVDRGLNGYARLAAKPTCHQVTVLFFGGPDDREALSYGWRMSRHPRVRLTVMHFVPKKQNVTVTTNNEEEDNGGENYSNENKCLDEEIMYEVEMIAEHDDSVEYLERVVGNGEETIGAIRAMNSVNDLFIVGRGQGTSSPLTEGLTDWSECPELGAIGDLLASSDFETSASVLVVNQYVEERPDGEEVIITEKPWLATDDDFYQTLLTRRTPMSRRHHRFESSPAMY 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60439g00025 853 PANTHER CATION/H + ANTIPORTER 23 805 - -
Stsc60439g00025 853 FunFam Cation/H(+) antiporter 15 50 454 - -
Stsc60439g00025 853 Gene3D - 50 453 IPR038770 -
Stsc60439g00025 853 Pfam Sodium/hydrogen exchanger family 57 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60439g00025 Stsc-Chr60439 94470 97198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60439g00025 18 820 Antiporter Super Family AT2G13620 60.025 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60439g00025 K26731 - gmx:100800514 1064.29