LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc60439g00002	ATGCAAACGAGGTACTTAGATAGATCAAGGGAGAAGCGAAGTTTGGATTCAACCTCCGCTGATGAAGACGAACCTCAAAAGAAGAGACCTGCTTTGGCCAGTGTAATTGTTGAAGCCCTGAAGGTGGACTGTCTGCAGAAGCTTTGTTCATCACTGGAGCCTATCCTACGTAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTAGCAAAACTAGGCACAGCCAAGCTTAGTGGGAGGACTTCTCCTAAGAAAATACAAGGCCATGATGGTAGCAATTTACAGTTACAATTCAAGACCAGGCTATCTCTTCCTCTCTTTACCGGCGGGAAAGTGGAGGGAGAGCAAGGCACTGCCATACATATTGTTCTGGTTGATGCAAGCACAGGCCATATTGTCACATCTGGTCCAGAGTCATGTCTAAAATTAGATGTTATTGTGCTTGAAGGGGATTTCAATAATGAGGATGATGATAATTGGAGTGAAGAAGAATTTGAGAGTCATGTTGTGAAAGAGCGAGAAGGAAAGAGACCTCTTTTGACCGGTGATCTGCAAGTGATACTGAAGGATGGTGTAGGTACCTTGGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGGCTCAAAGTTGCCTCAGATTGTAATGAGGGCAAGCGAATTCGCGAAGCGAAAACTGAAGCTTTCACTGTTAAAGATCACCGTGGAGAATTATACAAGAAACACTATCCACCTGCCCTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGTTCCTTTCACAAAAGGCTACATAGAGCAGGGATATTTACTGTTGAAGATGTCCTAAAACTAGTGGTCAGAGACCCACAGAGGTTGCGAAATATCCTTGGGAGTGGCATGTCAAATAAAATGTGGGATGTTCTTGTTGAACATGCAAAGACTTGTGTTCTCAGCGGAAAAGTTTATGTGTACTATCCTGATGATGCAAGGAGTGTTGGTGTTGTTTTTAATAACATCTATGAGCTGAGTGGCTTAATAGCCAATGACCAATACTACACTGCTGACTCTCTCTCTGACAGTCAAAAAGTATATGTGGACACATTGGTGAAGAAGGCATATGAAAATTGGATGTGTGTAATTGAGTATGATGGCAAGTCTCTGCTATATTACAATCAGAACAAGACATTGGGCACCGCTCAACCTCAACTTCCAATGGATTCCCATAATTATTCAAATTCAAACTCACTTGATCAGCAGACCTCCATCCCAAATTTACCTGTTCCTGCACCCACATGGCAACCTTCAATGGATCCAGGAGTAACAGTTGCAGGTTATCATGATAGTGCAGCTACTAGATTCTCAATCCAACCGCAGAATGATAATCTTAATTCTTCAATGCAGGCACAACACAATGTGATGACTCTTGGTCCTACACAACAATCAGGCACTCCTGGCTCACAGACAATTGGCATTTCTAATTATAGTAATAGAGGATTTGAAGATTACTTCCCAGAGGAGGAGATTCGAAGCAGAAGTCATGAAATGCTAGAAAATGAAGATATGCAGCGTCTGCTCCGCATTTTTAATGCCGAAGATGGATACCCCTATTTATCTAGCTACATGCCTACAGACGCCATGAGCTACAACTTTGACAATGAGAAGAACCGTTCGTCCAGAAAGACTGTGGTGGGCTGGCTAAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTGTTCGGAAGAAGGCAGCTGAGAGGCGAGCTCAGCTTGTTGAGTTGGATGACCCCTAG	1797	0.4352	MQTRYLDRSREKRSLDSTSADEDEPQKKRPALASVIVEALKVDCLQKLCSSLEPILRRVVSEEVERALAKLGTAKLSGRTSPKKIQGHDGSNLQLQFKTRLSLPLFTGGKVEGEQGTAIHIVLVDASTGHIVTSGPESCLKLDVIVLEGDFNNEDDDNWSEEEFESHVVKEREGKRPLLTGDLQVILKDGVGTLGELTFTDNSSWIRSRKFRLGLKVASDCNEGKRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLHRAGIFTVEDVLKLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKVYVYYPDDARSVGVVFNNIYELSGLIANDQYYTADSLSDSQKVYVDTLVKKAYENWMCVIEYDGKSLLYYNQNKTLGTAQPQLPMDSHNYSNSNSLDQQTSIPNLPVPAPTWQPSMDPGVTVAGYHDSAATRFSIQPQNDNLNSSMQAQHNVMTLGPTQQSGTPGSQTIGISNYSNRGFEDYFPEEEIRSRSHEMLENEDMQRLLRIFNAEDGYPYLSSYMPTDAMSYNFDNEKNRSSRKTVVGWLKLKAALRWGIFVRKKAAERRAQLVELDDP	598

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc60439g00002	598	MobiDBLite	consensus disorder prediction	1	28	-	-
	Stsc60439g00002	598	Pfam	Calmodulin binding protein central domain	252	318	IPR046830	-
	Stsc60439g00002	598	PANTHER	OS02G0177800 PROTEIN	11	524	IPR012416	GO:0005516
	Stsc60439g00002	598	Pfam	Calmodulin binding protein C-terminal domain	323	385	IPR046829	-
	Stsc60439g00002	598	Pfam	Calmodulin binding protein-like N-terminal domain	93	240	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc60439g00002	Stsc-Chr60439	5679	8692	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc60439g00002	9	593	Calmodulin-binding Proteins	AT5G57580	58.648	0.0	716

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc60439g00002	-		-	gmx:100802994	954.51