Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60437g00020 ATGGGAGGGGCTATTCTGTCGGAGCTCGCGACGGAGATAGTGATTCCGGTATGCGCCGTCATCGGGATCGTGTTCTCACTGGTGCAGTGGTTCCTCGTTTCGAAGGTGAAGCTCACGCCGCACGCGACGTCGTCTTCGAGTGGTAACAGCAACAACAACAACAACAACAACGGGAAGAATGGTTACGGAGATTACCTGATCGAAGAGGAGGAAGGAATCAACGACCACAGCGTCGTGGTCAAGTGTGCCGAGATTCAAAACGCCATCTCCGAAGGTGCCACGTCCTTTCTTTTCACTGAATATCAGTATGTGGGAGTCTTCATGGTTGCTTTTGCGGTTCTGATCTTCCTTTTCCTGGGCTCGGTGGAAAGCTTCAGCACCAAGAGCCAGGCTTGCACATATGACAAGACCAAGATCTGCAAGCCAGCCCTTGCAACTGCATTGTTCAGCACTGTATCATTTTTGCTCGGTGGTTTCACTTCGGTCCTCTCTGGTTACCTTGGGATGAAAATTGCAACCTATGCCAATGCCAGGACAACCTTGGAAGCAAGAAAGGGAGTTGGGAAGGCTTTTATTACTGCATTCAGGTCTGGAGCAGTGATGGGTTTTCTTCTTGCAGCAAATGGTCTTTTGGTGCTCTACATTGCCATTAATCTCTTCAAGATATATTATGGTGACGATTGGGAAGGTCTTTTTGAGGCTATAACTGGTTATGGCTTGGGTGGATCTTCCATGGCTCTGTTTGGGAGAGTTGGCGGTGGTATCTATACCAAGGCTGCTGATGTTGGTGCTGACCTTGTAGGAAAAGTTGAAAGAAATATCCCTGAGGATGATCCAAGAAACCCTGCTGTGATTGCTGACAATGTTGGTGATAATGTTGGAGATATTGCTGGGATGGGCTCTGATCTTTTTGGCTCATATGCTGAATCATCTTGTGCTGCCCTCGTTGTTGCTTCCATTTCCTCATTTGGAATCAACCATGACTTCACTGCCATGTTGTATCCCCTACTTGTCAGTTCTGTGGGCATTCTTGTCTGTTTGATTACTACTCTCTTTGCAACCGATTTCTTTGAGATCAAGGCTGTCAAGGAAATCGAACCAGCATTGAAAAAGCAGCTTATCATTTCTACAGCACTCATGACTATTGGAATTGCAATTATTAGTTGGCTTGCTCTCCCATCATCCTTCACTATTTTCAACTTTGGAGCTCAGAAAGAAGTTAAGAGCTGGCAGTTGTTTCTATGTGTGGCTGTTGGACTCTGGGCAGGACTTATTATAGGGTTTGTTACGGAATATTATACAAGCAACGCTTACAGCCCTGTACAAGATGTTGCTGATTCCTGCCGGACTGGAGCTGCAACCAATGTCATCTTTGGCCTTGCTCTAGGATACAAGTCTGTCATTATTCCTATTTTTGCCATTGCAATAAGTATCTTTGTAAGTTTCAGTTTTGCTGCAATGTATGGAATTGCTGTGGCTGCCCTTGGAATGCTTAGTACAATTGCTACTGGATTGGCTATTGATGCCTATGGACCTATCAGTGACAATGCTGGAGGCATTGCTGAAATGGCTGGAATGAGCCATCGTATCCGTGAGAGAACTGATGCACTTGATGCTGCCGGCAACACAACTGCTGCCATTGGCAAGGGATTTGCTATTGGATCTGCAGCTCTGGTATCTTTGGCCCTATTCGGTGCCTTTGTCAGCAGGGCAGGAATTTCAACTGTTGATGTCTTGACTCCCAAGGTCTTTATTGGACTCTTAGTGGGCGCCATGCTCCCCTACTGGTTTTCTGCCATGACCATGAAAAGTGTGGGAAGTGCAGCTTTGAAGATGGTTGAGGAAGTTCGCAGGCAGTTCAACACCATTCCAGGACTCATGGAGGGTCATGCCAAGCCCGACTATGCCACATGCGTCAAGATTTCCACCGATGCATCCATCAAGGAGATGATCCCTCCAGGTGCCCTTGTCATGCTTACACCACTCATTGTCGGTACCCTCTTCGGTGTGGAAACACTCTCAGGCGTTCTCGCAGGTGCTCTTGTTTCTGGTGTGCAGATTGCAATATCAGCCTCAAACACTGGTGGTGCCTGGGATAATGCTAAGAAGTACATTGAGGCCGGTGCATCTGAGCATGCTAGGACCTTGGGACCAAAGGGATCCGATCCACACAAGGCAGCCGTTATCGGCGACACCATTGGTGACCCTTTGAAGGACACTTCAGGGCCTTCACTGAATATCCTTATTAAGCTCATGGCCGTGGAGTCACTGGTCTTTGCTCCATTTTTCGCCACCCATGGCGGCCTTCTTTTCAAGCTCTTTTGA 2325 0.4761 MGGAILSELATEIVIPVCAVIGIVFSLVQWFLVSKVKLTPHATSSSSGNSNNNNNNNGKNGYGDYLIEEEEGINDHSVVVKCAEIQNAISEGATSFLFTEYQYVGVFMVAFAVLIFLFLGSVESFSTKSQACTYDKTKICKPALATALFSTVSFLLGGFTSVLSGYLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDFTAMLYPLLVSSVGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTALMTIGIAIISWLALPSSFTIFNFGAQKEVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGHAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTLFGVETLSGVLAGALVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKLF 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60437g00020 774 PIRSF H+-PPtase 8 772 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc60437g00020 774 MobiDBLite consensus disorder prediction 40 61 - -
Stsc60437g00020 774 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc60437g00020 774 Pfam Inorganic H+ pyrophosphatase 43 759 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc60437g00020 774 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Stsc60437g00020 774 NCBIfam V-type H(+)-translocating pyrophosphatase 10 769 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60437g00020 Stsc-Chr60437 166096 170834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60437g00020 4 637 Primary Pumps ATPases AT1G15690 88.328 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60437g00020 K23025 - gmx:100803691 1399.8