Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60437g00011 ATGGAGGAGTCAGGAGAAAATTGGCCTTCGGATTCTGATCTGGAAATGGGCGAAGACAATTATAATGATAATTGCTATGAAGAAGAAGAAGATGAGATTCAATATTTTGCTGAAGATGAGTTGTTAGATCCCATGATGGATGAGACCCAAAGAAAGCAGAAACAAAGGGAACTTGAAGAGAGATTGCTTGCTCTTTCAGCCACTATACCAAGTGGTGACTTTAATAATAATAATAATAACAAGATGGACGACAAATCAATCCTAGACAATGCTAGCAACTACGTGAAACAACTCCAACAACGAGTGAGGGAGTTAGAACAACAAGTTGGTGGTGGATTCAACAGCAACAACAAAGCTTCCACGTCTTATAATAATAATAATGATGAAGAAGTAAACTCTTACTATTATGGAGAAGAAGGTGGTGGTGGAAATAAAAATAATAATAATAATATTATTGTTCCTGAGGTGAAAGCAAAAGTGTTGAAAAACGAAGTGCTCATCATAATCCATTGTGAGAGACAAAAGGGTTTGATGCTCAAAATACTAACAAAGCTTGAAAATCTTCATCTTTCGGTTCTCAATCACAGTGTCTTGCCATTTGGGAATTCAACCCTTGACATAACCATTGTTGCTCAGATGGGAGATAAATACAACATAACAGTGGATGAATTAGTGGAGAGCCTGAGATTAACAATCTTGACACAATAG 708 0.3658 MEESGENWPSDSDLEMGEDNYNDNCYEEEEDEIQYFAEDELLDPMMDETQRKQKQRELEERLLALSATIPSGDFNNNNNNKMDDKSILDNASNYVKQLQQRVRELEQQVGGGFNSNNKASTSYNNNNDEEVNSYYYGEEGGGGNKNNNNNIIVPEVKAKVLKNEVLIIIHCERQKGLMLKILTKLENLHLSVLNHSVLPFGNSTLDITIVAQMGDKYNITVDELVESLRLTILTQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60437g00011 235 MobiDBLite consensus disorder prediction 1 29 - -
Stsc60437g00011 235 Coils Coil 88 108 - -
Stsc60437g00011 235 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 115 IPR036638 GO:0046983
Stsc60437g00011 235 PANTHER BHLH TRANSCRIPTION FACTOR 43 233 - -
Stsc60437g00011 235 Gene3D - 47 111 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60437g00011 Stsc-Chr60437 74109 78403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60437g00011 49 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 34.031 2.83e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60437g00011 - - aip:107616596 286.96