Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60437g00008 ATGGCAACGGCAGCTTCTGCAGCAAAGAAGAAAATATGTGTTACTGGTGCAGGAGGTTTCTTAGCTTCTTGGGTTGTTAAGCTGCTTCTTTCCAAAGGATACATCGTTCATGGCACTGTTAGACAACCTGGTGATGAGAAATATGCTCACTTGATGAAGCTTGAGGGAGCTTCTGAGAACCTGAAACTCTTCAAAGCTGATTTATTGAATTATGAATCAGTTCAGTCAGCAATTATTGGATGCAATGCTGTTTTCCATGTTGCTTGCCCTGTGCCTTCAACAACTTCAACCAACCCTGAGGTAGAAGTGATTGAACCTGCTGTCAAGGGAACTACCAATGTGCTTGAAGCTTCTCTTGAAGCTAAGGTGGAATGA 375 0.4293 MATAASAAKKKICVTGAGGFLASWVVKLLLSKGYIVHGTVRQPGDEKYAHLMKLEGASENLKLFKADLLNYESVQSAIIGCNAVFHVACPVPSTTSTNPEVEVIEPAVKGTTNVLEASLEAKVE 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60437g00008 124 Gene3D - 2 124 - -
Stsc60437g00008 124 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 123 IPR036291 -
Stsc60437g00008 124 Pfam NAD dependent epimerase/dehydratase family 12 123 IPR001509 -
Stsc60437g00008 124 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60437g00008 Stsc-Chr60437 42055 43404 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60437g00008 5 124 Monolignol Biosynthesis Gene Families AT2G33600 69.167 1.36e-55 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60437g00008 - - lja:Lj3g3v2171530.3 199.904