Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60437g00006 ATGGCGAAGGCAGCTTCTGCGACGGCGAAGAAGAAGGTATGCGTGACCGGTGCCGGTGGTTTCATAGCTTCTTGGCTGGTTAAGCTTCTCCTTTCCAAAGGATACATCGTTCATGGCACTGTTAGAAAACCTGGTGATGAGAAATATGCTCACTTGATGAAGTTTGAGGGAGCTTCTGAGAATCTAAAACTGTTCAAAGCAGATTTGTTGAGTTATGAATCCATTTACTCAGCAATTGTTGGATGCAGTGCAGTTTTCCATGTTGCTTGCCCTGTACCAGCAATAGCAGCTACTTTCCAAAATCCTGAGGTAGAAATGGTTGAGCCTGCTGTGAAGGGAACTAGTAATGTTCTAGAAGCTTCTCTTGAGGCTAAGGTGGAGAGAGTTGTTTATGTCTCATCCTCAACTGCTATTATCAGGATCCAGAATTTGCCTAATGATAAAGTGATTGATGAATCATATTGGTCTGATAAAGAATACTGCAGAGAAAACAAGGAATGGTATCCCTTTTCAAAGACAGAAGCGGAAGAGCAGGCGCTGGATTTCGCAGAAAGAAATGGGATTGATCTTGTGAGAATTTGTCCTACTTTTGTGTTTGGGCCAATTTTGCAGTCAACTTCTGTGAATGCAACTAGCTTGTTTCTCCTCAACCTTCTAAAAGGCTGTCAGCCAGTGGAGAATAAGCTTAGGTGGATAATAGATGTAAGAGATCTAGCAGATGCATTAGTATTGGCTTATGAAAAGATTGAAGCACAAGGGAGATACATATGCACTTCATGCCCTGCTAAGCCAAAGGATTTGGTACACAAATTGAAGAGCTTATATCCAAATTACAACTACATTACAGAGTTTATTGAGGTGGATTATTACATAAGGTTGAGCTCCGAGAAACTAGAGAGACTTGGTTGGAGTTACAGGCCATTAGAGGAGACACTCATTGATTCTGTTGAGAGCTATAAGGAGGCTGGTCTCTTAGAATCCAAGTAA 987 0.4164 MAKAASATAKKKVCVTGAGGFIASWLVKLLLSKGYIVHGTVRKPGDEKYAHLMKFEGASENLKLFKADLLSYESIYSAIVGCSAVFHVACPVPAIAATFQNPEVEMVEPAVKGTSNVLEASLEAKVERVVYVSSSTAIIRIQNLPNDKVIDESYWSDKEYCRENKEWYPFSKTEAEEQALDFAERNGIDLVRICPTFVFGPILQSTSVNATSLFLLNLLKGCQPVENKLRWIIDVRDLADALVLAYEKIEAQGRYICTSCPAKPKDLVHKLKSLYPNYNYITEFIEVDYYIRLSSEKLERLGWSYRPLEETLIDSVESYKEAGLLESK 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60437g00006 328 FunFam Dihydroflavonol reductase 10 327 - -
Stsc60437g00006 328 Gene3D - 2 328 - -
Stsc60437g00006 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 320 IPR036291 -
Stsc60437g00006 328 CDD FR_SDR_e 13 303 - -
Stsc60437g00006 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 316 - -
Stsc60437g00006 328 Pfam NAD dependent epimerase/dehydratase family 13 252 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60437g00006 Stsc-Chr60437 31965 34272 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60437g00006 10 326 Monolignol Biosynthesis Gene Families AT2G33590 57.547 5.56e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60437g00006 - - adu:107463733 550.051