Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60436g00030 ATGGATGAGAGAAGCTTTTCAATAACTTCATCACAAGGCCAACAACAGGCACCGACATATGTGCACAAAGTAGGAATTCCTCCACGACAGAACCTGTTCCAAGAATTCAAGGCCACCATCAAGGAGACATTCTTTGCTGATGATCCTCTAAGATCCTTCAAGGACCAACCGAAATCGCGAAAGTTCATCCTCGGTGTTGAGGCCTTGTTCCCCATACTCAACTGGGGGAGAAATTACAACCTTAAGAAGTTCAGAGGAGATCTTATATCTGGCCTAACTATTGCAAGTCTTTGCATTCCCCAGGATATTGGATATGCCAGGCTTGCAAAGTTGCAACCCCAATATGGATTGTACTCAAGCTTTGTTCCACCACTAATCTATGCTGTCATGGGTAGCTCCCGTGATATCGCGATAGGACCGGTGGCAGTGGTTTCTCTCTTGTTGGGAACCTCACTTAGTAATGAGATTGATCCTACTACAAATCCAGACGAATATCTGAGACTTGCCTTCACAGCCACTTTTTTTGCTGGGATTACTCAAGCAACACTTGGGATTTTCAGGTTGGGATTCTTGATTGACTTCCTATCCCATGCGGCTATTGTTGGTTTTATGGGGGGTGCTGCCATCACCATTGCCCTTCAACAACTTAAGGGCTTTCTTGGGATTGAAACAAAAAATTTCACAAAAAAAACTGATATTGTCAATGTTATGCATTCTGTAGTCTCAACAGCTCATCATGGATGGAATTGGCAAACTATACTCATTGGAGCAAGCTTCTTGGGTTTTCTTCTATTTGCCAAATTCATTGGAAAGAAGAACAAAAAGTTCTTCTGGGTGCCAGCAATTGCCCCATTGATATGTGTTATCCTGTCTACTTTTTTTGTATTCATAACACGTGCAGATAAGCATGGAGTAGAAATTGTTAACCACATTAAAAAGGGGATCAATCCTTCATCTGTTAAACAAATATATTTCAACGGTGACTACCTTGGGAAAGGTTTTAGAATTGGTGTCATGGCAGGCATGATAGCACTGACTGTAAGTTCAATGACTTCATGTTATGTTGCAACTGGTTCTTTCTCTAGGTCAGCAGTAAATTTCATGGCTGGTTGTGAAACTGCAGTATCTAATATTGTAATGTCAGTAGTTGTGTTCTTAACCCTGGAATTCATCACTCCCCTTTTTAAGTACACTCCAAATGCCATTCTTTCTTCCATCATCATTTCGGCTGTCATCAACCTTGTGGACTATCAGGCAGCTATTTTGATTTGGAAGATTGATAAATTTGATTTTGTCGCTTGCATGGGAGCATTCTTTGGTGTTGTTTTTGCCACTGTTGAGATAGGACTTCTAATTGCTGTTTCTATATCCTTTGCAAAGATTCTACTACAAGTTACAAGGCCTAGAACTTGTATTTTGGGGAAGATTCCTAGAACAACTGTCTATAGAAACATCCATCAATACCCCGAAGCTACTAAGGTTCCAGGTGTACTCATTGTGAGAGTTGATTCTGCAATATATTTTTCCAACTCCAATTATGTCCAAGAAAGGATACTAAGATGGTTGATGGATGAAGAAGAAGAAGGTAAAGGAGACTACCAAACAAGAATCCAGTTTTTGATTGTTGAAATGTCACCCGTTACTGACATAGACACCAGTGGCATCCATGCCCTTGAAGAGTTACACAGAAGCCTTGAGAAAAGAGATATTGAGCTTGTTCTGGCAAATCCTGGTCCAGTAGTGATTGACAAGGTTTACACATCAAAGCTTGCGAACATGATTGGTGAGAACAAGATCTTCCTGACAGTTGCAGAGGCAGTTGCATATTGTTCTCCAAAGCTATCTGAAGATCCATGA 1857 0.4082 MDERSFSITSSQGQQQAPTYVHKVGIPPRQNLFQEFKATIKETFFADDPLRSFKDQPKSRKFILGVEALFPILNWGRNYNLKKFRGDLISGLTIASLCIPQDIGYARLAKLQPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTSLSNEIDPTTNPDEYLRLAFTATFFAGITQATLGIFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIETKNFTKKTDIVNVMHSVVSTAHHGWNWQTILIGASFLGFLLFAKFIGKKNKKFFWVPAIAPLICVILSTFFVFITRADKHGVEIVNHIKKGINPSSVKQIYFNGDYLGKGFRIGVMAGMIALTVSSMTSCYVATGSFSRSAVNFMAGCETAVSNIVMSVVVFLTLEFITPLFKYTPNAILSSIIISAVINLVDYQAAILIWKIDKFDFVACMGAFFGVVFATVEIGLLIAVSISFAKILLQVTRPRTCILGKIPRTTVYRNIHQYPEATKVPGVLIVRVDSAIYFSNSNYVQERILRWLMDEEEEGKGDYQTRIQFLIVEMSPVTDIDTSGIHALEELHRSLEKRDIELVLANPGPVVIDKVYTSKLANMIGENKIFLTVAEAVAYCSPKLSEDP 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60436g00030 618 FunFam Sulfate transporter 31 467 613 - -
Stsc60436g00030 618 PANTHER SULFATE TRANSPORTER 30 347 IPR001902 GO:0016020|GO:0055085
Stsc60436g00030 618 Pfam Sulfate permease family 84 346 IPR011547 GO:0016020
Stsc60436g00030 618 SUPERFAMILY SpoIIaa-like 489 611 IPR036513 -
Stsc60436g00030 618 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Stsc60436g00030 618 Gene3D STAS domain 467 613 IPR036513 -
Stsc60436g00030 618 Pfam STAS domain 488 606 IPR002645 -
Stsc60436g00030 618 CDD STAS_SulP_like_sulfate_transporter 488 603 - -
Stsc60436g00030 618 ProSiteProfiles STAS domain profile. 487 610 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60436g00030 Stsc-Chr60436 243111 247072 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60436g00030 2 617 Inorganic Solute Cotransporters AT1G22150 71.914 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60436g00030 K17470 - gmx:100797668 1010.36