Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60436g00028 ATGAGCTCATTGGGCACAGAGCAATTTTCTGAGAGGTCTCAATGGGTGCTTAATTCCCCCAATCCACCTCCTCTAACCAAGAAATTTCTTGGTCCTTTGAAGGACAACAAGTTCTTCACTTCATCCTCATCCAAGAAGGAAACTCGCGCGGTTTCCTTCTTGGCGAGTTTGTTCCCAATCCTTAGCTGGATCAGAACTTACTCAGCCACCAAGTTCAAGGATGATTTGCTATCTGGTTTAACTCTTGCCAGCCTCAGCATACCCCAGAGCATAGGATATGCAAATTTGGCCAAACTTGATCCTCAATATGGCTTGTACACTAGTGTGATTCCTCCTGTTATCTACGCATTAATGGGGAGCTCAAGAGAAATTGCTATTGGACCTGTGGCTGTTGTGTCAATGCTGTTATCTTCCCTCGTTCCAAAAGTGATAGATCCTGATGCTCATCCAAATGACTACAGAAACCTTGTCTTTACAGTCACTTTGTTTGCCGGAATCTTTCAAACTGCCTTTGGAGTTCTAAGGTTGGGATTTCTGGTGGATTTTCTTTCACATGCTGCACTTGTGGGATTCATGGCAGGTGCAGCCATTGTTATTGGTCTTCAGCAACTCAAGGGGTTGCTGGGGCTCACTCACTTCACCACCAAGACAGATGCAGTAGCAGTATTGAAATCTGTTTATACTTCACTCCATCAACAAATTACATCCTCAGAAAATTGGTCCCCTCTTAACTTTGTCATTGGGTGTTCATTCCTGATTTTTCTTTTGGCTGCTCGATTTATTGGCAGAAGGAACAAGAAATTTTTCTGGCTGCCAGCCATTGCTCCTCTTCTATCGGTTATATTATCAACTTTGATTGTATTTTTATCGAAAGGTGATAAGCATGGGGTTAACATAATAAAGCATGTTCAAGGAGGGCTTAATCCAAGTTCAGTTCACAAGTTACAACTAAATGGCCCACATGTTGGACAAGCAGCTAAAATTGGATTGATTTCTGCCATTATCGCTCTTACCGAAGCAATAGCCGTTGGAAGATCTTTTGCTAACATCAAGGGATATCATCTTGATGGAAATAAAGAAATGTTGGCAATGGGTTGCATGAACATTGCAGGATCATTAACTTCTTGCTACGTGTCAACTGGGTGCAAAACAGCAGTGTCAAACATAGTGATGGCGGTGACGGTGCTTCTATGCTTGGAATTGTTTACAAGACTATTGTATTACACTCCAATGGCAATACTTGCGTCTATAATCCTCTCAGCACTGCCTGGATTGATAGACATTGGTGAAGCTTATCACATATGGAAGGTTGATAAATTCGACTTTCTTGCTTGCCTTGGTGCTTTCTTCGGAGTCTTGTTTGTATCCATTGAGATTGGTCTTCTTATTGCTTTGTCAATCTCATTTGCAAAGATATTATTACAAGCAATTAGACCCGGTGTTGAAGTTCTAGGAAGAATTCCAACCACAGAAGCTTATTGCGATGTTGCTCAGTATCCCATGGCCGTAACAACCCCTGGGATACTAGTCATTCGCATAAGCTCTGGATCACTCTGCTTCGCAAATGCCGGTTTTGTAAGAGAAAGAATACTGAAGTGGGTGGAGGATGAAGAACAAGATAACATTGAAGAAGCTGCTAAGGGAAGGGTGCAAGCTATAATCATTGACATGACTGACCTCACCAATGTTGATACTTCTGGAATCCTAGCACTGGAGGAACTGCATAAGAAGTTGCTTTCACGTGGCGTAGAATTGGCTATGGTAAATCCAAGGTGGGAAGTGATTCATAAGCTTAAAGTGGCAAACTTTGTAGATAAAATTGGAAAAGAAAGGGTTTTCCTTACTGTTGCTGAAGCCGTAGATGCTTGTCTATCTTCTAGATTTGCCAACTCTGCTTGA 1899 0.4202 MSSLGTEQFSERSQWVLNSPNPPPLTKKFLGPLKDNKFFTSSSSKKETRAVSFLASLFPILSWIRTYSATKFKDDLLSGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPVIYALMGSSREIAIGPVAVVSMLLSSLVPKVIDPDAHPNDYRNLVFTVTLFAGIFQTAFGVLRLGFLVDFLSHAALVGFMAGAAIVIGLQQLKGLLGLTHFTTKTDAVAVLKSVYTSLHQQITSSENWSPLNFVIGCSFLIFLLAARFIGRRNKKFFWLPAIAPLLSVILSTLIVFLSKGDKHGVNIIKHVQGGLNPSSVHKLQLNGPHVGQAAKIGLISAIIALTEAIAVGRSFANIKGYHLDGNKEMLAMGCMNIAGSLTSCYVSTGCKTAVSNIVMAVTVLLCLELFTRLLYYTPMAILASIILSALPGLIDIGEAYHIWKVDKFDFLACLGAFFGVLFVSIEIGLLIALSISFAKILLQAIRPGVEVLGRIPTTEAYCDVAQYPMAVTTPGILVIRISSGSLCFANAGFVRERILKWVEDEEQDNIEEAAKGRVQAIIIDMTDLTNVDTSGILALEELHKKLLSRGVELAMVNPRWEVIHKLKVANFVDKIGKERVFLTVAEAVDACLSSRFANSA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60436g00028 632 Gene3D STAS domain 478 626 IPR036513 -
Stsc60436g00028 632 PANTHER SULFATE TRANSPORTER 44 624 IPR001902 GO:0016020|GO:0055085
Stsc60436g00028 632 SUPERFAMILY SpoIIaa-like 503 623 IPR036513 -
Stsc60436g00028 632 MobiDBLite consensus disorder prediction 1 20 - -
Stsc60436g00028 632 Pfam Sulfate permease family 72 446 IPR011547 GO:0016020
Stsc60436g00028 632 NCBIfam sulfate permease 59 619 IPR001902 GO:0016020|GO:0055085
Stsc60436g00028 632 FunFam Sulfate transporter 31 478 626 - -
Stsc60436g00028 632 CDD STAS_SulP_like_sulfate_transporter 499 616 - -
Stsc60436g00028 632 ProSitePatterns SLC26A transporters signature. 101 122 IPR018045 GO:0008271|GO:0008272
Stsc60436g00028 632 Pfam STAS domain 499 619 IPR002645 -
Stsc60436g00028 632 ProSiteProfiles STAS domain profile. 515 623 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60436g00028 Stsc-Chr60436 226231 231491 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60436g00028 5 624 Inorganic Solute Cotransporters AT5G10180 61.815 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60436g00028 K17469 - gmx:100805269 967.222