Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60436g00026 ATGTCTTCGTCTTCCTCGGCGGCGGCTGCGGCGAACAATTCGCCGTGCGCGGCGTGCAAGATTCAGCGGCGGAAGTGCACACAGGAGTGTGTGTTCGCGCCGTACTTCCCGCCGGATAACCCGCAGAGATTCGCGTACGTTCACAAGGTGTTCGGAGCAAGTAACGTAGCGAAACTCCTGAACGACCTGAACGCGGCGCAGAGGGAGGACGCCGTGAAGTCTCTGGCGTACGAGGCGGAGGCGCGTCTCCGTGACCCCGTGTACGGTTGCGTAGGCCTCATCTCACTCCTCCAGCACAAGCTCAAACAGCTCCAGGCTGAGCTTAACCACGCCAAGACGGAACTCGCAAACTACGCTGTTGTTAACAACAATAACAATAACAATAATAACGGCTCTCCTCACGCGCCTGTTCTCCCGCTCTTTAGCAGCCAACATCACCAGCAACCGCCTCAACTGAATCGTAACAACCTCTCCACTCAACCGTTTTCTGTTTCTGTTTCTCCCTTTCAGGAGGTTGTTATGCAGCATCAGCAAGATCTTTTGGGGTTTGAGAACTATATGGCGGTTGGTTCTTCTTCTGCTGTTTCACCTTCGCTGGCTCTCGGACCGGTTGATCACAGCTTTCACCACCATCATCATCACCATAATCTGCAGCAGCAGCTTCAGGTGCATCATCAGTCTTTCATGTTTCATAAGCAGGCAAAGTTCGAAGGCGAGGAGGGTAGGAATAGCAGGAGGACCGGTCCTTCTTGTTGCTGA 759 0.5389 MSSSSSAAAAANNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNDLNAAQREDAVKSLAYEAEARLRDPVYGCVGLISLLQHKLKQLQAELNHAKTELANYAVVNNNNNNNNNGSPHAPVLPLFSSQHHQQPPQLNRNNLSTQPFSVSVSPFQEVVMQHQQDLLGFENYMAVGSSSAVSPSLALGPVDHSFHHHHHHHNLQQQLQVHHQSFMFHKQAKFEGEEGRNSRRTGPSCC 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60436g00026 252 MobiDBLite consensus disorder prediction 123 158 - -
Stsc60436g00026 252 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 156 - -
Stsc60436g00026 252 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
Stsc60436g00026 252 Coils Coil 94 121 - -
Stsc60436g00026 252 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60436g00026 Stsc-Chr60436 192590 193348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60436g00026 10 181 AS2 family AT5G66870 59.302 5.41e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc60436g00026 LOB 2.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60436g00026 - - adu:107460830 418.313