Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60436g00025 ATGTTTCTTCTAATACTTCAACAAAGTCCGGGAGTCATTAACTCTGAGATTGAAGAACTCCAACAAGAAGTTAGTAGGCTACATCAACAACTTCAATTAGCTGAAGACCAGATAAGGGCATATGAACCGGATCCATTAAAGATGACATCAATGGAGGAACTCGAATCTAGTGAAAAGAATCTTGTAGAGACTTTAACACGCGTCGCGCAAAGAAAGGAATATCTATTGAGCAGCCATTTATCTACTTATGATCCTTCAGCTATTCAGGGGATGCCATCAACTTTTGAGAATGTGGGATGGTTGCAAAATAATGGTAGCCAAAGCCACAACCAAATATTTGATGCATCTACTCCTTTGGATCCACTCAGGGATTTGCAATCATCAATTTACGATCCATTTCCACAAGGAACAAATTCACAGAGCGATTCAAGAAATATTGGAGAGTGTCACGTGACAAACCAAAACGACACGTGGCCTCAAGGATACACGTTATACTCTCATTTGCAGCATGAGATAGTGGGACCCGACATGTCGAATATGATGACGACACAAGGACAATTGAATCTTCCAATTACAGCTTCCAATTTGCAACCTCCCAACAATGAAGCTGGAGATCAATATGAGTGTGAACCTCAAAATCAACTTAACACCCAATAA 657 0.4018 MFLLILQQSPGVINSEIEELQQEVSRLHQQLQLAEDQIRAYEPDPLKMTSMEELESSEKNLVETLTRVAQRKEYLLSSHLSTYDPSAIQGMPSTFENVGWLQNNGSQSHNQIFDASTPLDPLRDLQSSIYDPFPQGTNSQSDSRNIGECHVTNQNDTWPQGYTLYSHLQHEIVGPDMSNMMTTQGQLNLPITASNLQPPNNEAGDQYECEPQNQLNTQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60436g00025 218 Pfam K-box region 16 82 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc60436g00025 218 Coils Coil 17 37 - -
Stsc60436g00025 218 MobiDBLite consensus disorder prediction 195 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60436g00025 Stsc-Chr60436 187093 188817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60436g00025 10 193 Type I MADS-box Gene Family AT1G22130 47.739 1.61e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60436g00025 - - ahf:112708330 382.489