Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60436g00016 ATGGACATATTTGAGGCATTCCCACAAGTTAGCATGTGGGGTGATGGTGGTCTCATAAATTCAATAACTTCTCCAATGTTGTTGGTGAGCACTAGCAGCATGGCCATGGACAACAAGCCTGAATATGTACCTCATGAATTGAGGGAACAATCTAGACAGAATCAAGAGGCTACCAACAAAGATGTTAGTAAGGTACTAAGACGGCTAGCTCAGAATCGAGAGGCTGCTCGGAAGAGCCGGATGCGAAAAAAGGCTTATGTTCAACAATTAGAAACAAGCCGTTTGAAGCTCATGCAATTGGAGGAGGAGATTGTTAAAGCAAGAAAGCAGAGTATGTATATTGGCAATAATCCATTGGATATGGGATCATCTGGATCATTAAACTCAGGGATTGTTTTGTTTGAAATTGAATATGGAAATTGGATTGAAGAGCAAAACAAACTGAATGAAGAACTCAGAAATGCATTCCAAACTCAAGCACCTGATGAACAACTCAATCTACTAGTTCAGACTGTCTTGAACCACTACTCAAATCTTTTCAAGATGAAAGCAGATGCAGCAAAGGCTGATATATTCTACCTAATCAGTGGTGTTTGGAAATCATCCGCGGAGCGCCTTTTCCTTTGGATCGGAGGATCTCGCCCTTCCCAGCTTCTAAGTATCATTCTGCCCCAGCTTGAGCCTTTGACTGAAGAACAAACTGCTAGCATTAGCAGACTGCGGCTATCGTCGCAACAAGCCGAAGATGCACTCTCACAAGGACTGGATAGACTCCAGCAGAGTCTTGTCCACAACATAGCAGTTGATCCATTGGTAGCAGGAAACTTGGGGTTTCAGATTGCTGATTCCATGGAGAAAATTGAAGAACTAGAAGGCTTTCTTAACCAGGCAGATCATCTTAGGCAACAGACACTGATACACATGTCAAGGATCCTTACAACACATCAAGCTGCAAAAGGATTGCTGGCTTTGTGGCAATACTTTCACAGACTTAAATCTCTGAGTTCTCTTTGGGCTTCTCGTCCATCTCAGTTACCTCTCTAG 1044 0.4291 MDIFEAFPQVSMWGDGGLINSITSPMLLVSTSSMAMDNKPEYVPHELREQSRQNQEATNKDVSKVLRRLAQNREAARKSRMRKKAYVQQLETSRLKLMQLEEEIVKARKQSMYIGNNPLDMGSSGSLNSGIVLFEIEYGNWIEEQNKLNEELRNAFQTQAPDEQLNLLVQTVLNHYSNLFKMKADAAKADIFYLISGVWKSSAERLFLWIGGSRPSQLLSIILPQLEPLTEEQTASISRLRLSSQQAEDALSQGLDRLQQSLVHNIAVDPLVAGNLGFQIADSMEKIEELEGFLNQADHLRQQTLIHMSRILTTHQAAKGLLALWQYFHRLKSLSSLWASRPSQLPL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60436g00016 347 ProSiteProfiles DOG1 domain profile. 131 341 IPR025422 GO:0006351|GO:0043565
Stsc60436g00016 347 FunFam BZIP family transcription factor 63 112 - -
Stsc60436g00016 347 SMART brlzneu 60 120 IPR004827 GO:0003700|GO:0006355
Stsc60436g00016 347 Pfam Seed dormancy control 150 223 IPR025422 GO:0006351|GO:0043565
Stsc60436g00016 347 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 67 82 IPR004827 GO:0003700|GO:0006355
Stsc60436g00016 347 Gene3D - 63 114 - -
Stsc60436g00016 347 Pfam bZIP transcription factor 64 96 IPR004827 GO:0003700|GO:0006355
Stsc60436g00016 347 SUPERFAMILY Leucine zipper domain 64 102 IPR046347 GO:0003700|GO:0006355
Stsc60436g00016 347 Coils Coil 83 110 - -
Stsc60436g00016 347 PANTHER TRANSCRIPTION FACTOR TGA9 33 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60436g00016 Stsc-Chr60436 111451 113667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60436g00016 49 344 Calmodulin-binding Proteins AT1G22070 57.333 1.05e-118 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc60436g00016 DOG1 1.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60436g00016 K14431 - gmx:100794268 472.626