Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60436g00015 ATGAGCAATTTCATAACCCTTTATAAGCCTCACACACTCTTCTTCTCCTCTTTCATTGCTTGCAGACACCAATTTCAAACCAGGCCTTCTTCCTTTCGGAACCCTAATTGCAATTCCCGTTTGCCCTCTCCTTCTTTATACTCTTCCTGGCTCATCGATTCGTGGGGTTCCACCCGGACTGGACTCTGGTTTCGCGTTAATCAGAGGAGAACTCTGGCCAAGGCTTCAAATTGGGACCAACAACAATCCCCATATGAAACCCTTGAATTGGACAGAGATGCTGATGAGGATCAGATAAAGAGCGCTTATCGACGATTGGCTAAATTCTATCATCCAGATGTCTATGATGGTAGAGGAACCCTTGAGGAAGGCGAAACAGCAGAAGCTAGGTTCATTAAGATCCAAGCTGCTTATGAACTGCTCATAGATGAGGAGAAGCGAAGACAGTACGATATGGATAACCGAGTCAACCCCATGAAGGCATCTGAGGCATGGATGGAGTGGCTAATAAAAAAGCGAAAAGCTTTTGATCAACGTGGTGATATGGCAGTTGCCGCTTGGGCTGAGCAGCAACAACGAGAGTTGAATCTACGTGTCCGTCAACTTTCTCGTTCAAAGATGGATCCTGATGAGGCAAGGAAGATCCTGGCAAGAGAGAAAGCGGCTGCTGCTAAGAATTTCTCCAATACCCTTAAAAGGCACACACTTGTTCTGAAGAAAAGAGATTTGATGAGAAGAAAGGCTGAGCAAGATAAAGATAAACTTATCAGCCAACTCTTGGCAGCAGAAGGTCTTGAATCAGAGAGTGATGAGTGA 816 0.4522 MSNFITLYKPHTLFFSSFIACRHQFQTRPSSFRNPNCNSRLPSPSLYSSWLIDSWGSTRTGLWFRVNQRRTLAKASNWDQQQSPYETLELDRDADEDQIKSAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDEEKRRQYDMDNRVNPMKASEAWMEWLIKKRKAFDQRGDMAVAAWAEQQQRELNLRVRQLSRSKMDPDEARKILAREKAAAAKNFSNTLKRHTLVLKKRDLMRRKAEQDKDKLISQLLAAEGLESESDE 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60436g00015 271 PANTHER CO-CHAPERONE PROTEIN DJLA 55 268 - -
Stsc60436g00015 271 ProSiteProfiles dnaJ domain profile. 83 154 IPR001623 -
Stsc60436g00015 271 FunFam Chaperone protein dnaJ 69 174 - -
Stsc60436g00015 271 ProSitePatterns Nt-dnaJ domain signature. 131 150 IPR018253 -
Stsc60436g00015 271 CDD DnaJ 84 143 IPR001623 -
Stsc60436g00015 271 SMART dnaj_3 82 146 IPR001623 -
Stsc60436g00015 271 PRINTS DnaJ domain signature 172 191 IPR001623 -
Stsc60436g00015 271 PRINTS DnaJ domain signature 85 103 IPR001623 -
Stsc60436g00015 271 PRINTS DnaJ domain signature 103 118 IPR001623 -
Stsc60436g00015 271 PRINTS DnaJ domain signature 126 146 IPR001623 -
Stsc60436g00015 271 SUPERFAMILY Chaperone J-domain 34 150 IPR036869 -
Stsc60436g00015 271 Gene3D DnaJ domain 66 166 IPR036869 -
Stsc60436g00015 271 Pfam DnaJ domain 84 151 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60436g00015 Stsc-Chr60436 108279 110893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60436g00015 75 151 C2H2 Transcription Factor Family AT1G74250 37.662 2.58e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60436g00015 - - ahf:112766429 477.248