Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60434g00035 ATGGACAAAACCATCAAGTCTGGCTCTGGAATGGAGCTTGCATTGCTCATTGCCTTCATTTTCATGCTTACATGCAACCCGACTTCAATAGTGGCCCAAGAATTCGTAGAAGAAAACAAAGGCCACCAAAGTGAATTACAAACTTACATAGTTCATGTCAATAGGCCAGAAAGAAACAACAACAACAACAACAATGGAGTTTCTCTTCAATCAGAAGAGTTGCATGGCTGGTACCAAACACTTTTGCCGCAAACCATTTCAAACTCCATTAAGGAGCGTATGGTTTTCTCTTACCGCAACGTGGCCTCTGGTTTCGCCGTGAAGTTAACACCAGAAGAAGCCAAAGCTTTGGGAGAGAAAGATGAAGTTATTTCAGCTAGACCTGAAAGAACCCTCACTCTTCACACAACTCACACTCCATCTTTCTTGGGTCTCCGTCAGGGATACGGCTTGTGGAAAGATTCCAACCTTGGAAGAGGCGTAATCATCGGAGTTATAGACACCGGAATATTCCCCTTCCATCCTTCCTTCAACGACGAAGGAATGCCGCCTCCACCGGCCAAGTGGAATGGTTATTGCGAATTCACGGGACAAAGAACATGCAACAACAAACTCGTTGGTGCAAGAAACCTTGTCAAGGAAGCACCTGAAGAGCCTCCTTTCGAAAACTTCTTCCACGGAACGCACACGGCCGCGGAGGCAGCTGGAGCGTTCGTGGGGAACGCCAGTGTTTTTGGCAATGCCAGGGGAACTGCAGCTGGGATGGCGCCCGGTGCACACGTGGCAATGTACAAAGTGTGCAACGACAAAGTCGGGTGCACTGAAAGCGCCATCCTAGCTGCAATGGACATTGCCATTGAAGATGGCGTGGATGTTCTCTCTTTGTCCCTCGGTTTAGGCTCTCTTCCGTTCTTCGACGACCCGATTGCGATCGGCGCCTTTTCAGCCATCCAAAGCGGGATCTTCGTCAGTTGCTCAGCCGCTAACAGTGGTCCTCGATACAGCACTTTGTCAAATGAAGCTCCATGGATTCTCACCGTTGGTGCAAGCACCATTGACAGAAAGATAGCAGCTCTAGCAAAATTTGGAAACGGTGCTGAATATCCCGGAGAAACTCTGTTCCAGCCAAGTAACTTTTCCTCAGAGCTATTACCTCTTGTGTACCCTGGTTCAAATGGAAACAATGAATCTGCTTTCTGCACACCAGGATCCTTAGACAACTTTGATGTCAAAGGAAAGGTTGTAGTTTGCGACATAGGTAGAATTACAAGTTATAGCAAAGGACAAGAAGTTCTCAGAGCTGGTGGTGCCGCCATGATTATCACCACCCCAGAAATCGTTGGGTACAGCACCCTCGCCAACGCTTACCCTCTCCCTGCACTGCAGGTGGGTTTTAGCTTCAGTGAGGCCATCAAATCTTACATAAACTCATCATCAACCACATCAGCAACGGCAACAATCTTGTTTCAAGGAACCATAATTGGAGATTCACTTGCACCCGAAGTTGTTTTCTTCTCTTCGAGAGGTCCAAGCCAGGAAAGCCCTGGAATCTTGAAACCAGACATAATTGGACCCGGAGTGAATATTCTAGCAGCATGGGGTGTCTCTGTAGACGACAAAGTACCATCTTACAATGTTGTCTCTGGAACTTCAATGTCATGCCCTCACCTCAGCGGCATTGCTGCTTTACTCAAAAGCGCGCATCCCGATTGGTCCCCGGCAGCCATTAAATCAGCAATCATGACAACTGCTGATACAAAGAACCTTGGAGGCTTTCCCATTCTGGATCAAACTCATTTCCCCGCTGACATTTTTGCAACTGGTGCAGGACATGTTAACCCTAACAGAGCAAATGATCCTGGTCTTGTTTATGATATCCAACCTGATGATTACATCCCTTATCTCTGTGGATTGGGTTACACGGACAGAGAGATTGGAATTCTTGTTCAAAGGAAAGTGGTGTGTGCCAATGTTACTGCCATAGCAGAAGCACAACTCAACTACCCTTCGTTTTCTATTATATTGGGGTCTACTTCACAATACTACACTAGAACGTTGACCAATGTTGGACCAGCAAATTCAACCTACATTTTGGATGTTGATGTGCCTTTGGGTTTGGGTGTGAGCGTAAGCCCTGCTCATATAAAGTTCACTGAGTTGAATCAGAAGGTTATGTATTCGGTAGAGTTTATTCCACAAGTGGGAGTAGACAGAGGAAACAGTAGTTTTGGTCAAGGTGCTATCACATGGATATCTGATAAACACAGTGTTAGGACCCCCATATCTGTTATTTTCAAGTGA 2301 0.4637 MDKTIKSGSGMELALLIAFIFMLTCNPTSIVAQEFVEENKGHQSELQTYIVHVNRPERNNNNNNNGVSLQSEELHGWYQTLLPQTISNSIKERMVFSYRNVASGFAVKLTPEEAKALGEKDEVISARPERTLTLHTTHTPSFLGLRQGYGLWKDSNLGRGVIIGVIDTGIFPFHPSFNDEGMPPPPAKWNGYCEFTGQRTCNNKLVGARNLVKEAPEEPPFENFFHGTHTAAEAAGAFVGNASVFGNARGTAAGMAPGAHVAMYKVCNDKVGCTESAILAAMDIAIEDGVDVLSLSLGLGSLPFFDDPIAIGAFSAIQSGIFVSCSAANSGPRYSTLSNEAPWILTVGASTIDRKIAALAKFGNGAEYPGETLFQPSNFSSELLPLVYPGSNGNNESAFCTPGSLDNFDVKGKVVVCDIGRITSYSKGQEVLRAGGAAMIITTPEIVGYSTLANAYPLPALQVGFSFSEAIKSYINSSSTTSATATILFQGTIIGDSLAPEVVFFSSRGPSQESPGILKPDIIGPGVNILAAWGVSVDDKVPSYNVVSGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADTKNLGGFPILDQTHFPADIFATGAGHVNPNRANDPGLVYDIQPDDYIPYLCGLGYTDREIGILVQRKVVCANVTAIAEAQLNYPSFSIILGSTSQYYTRTLTNVGPANSTYILDVDVPLGLGVSVSPAHIKFTELNQKVMYSVEFIPQVGVDRGNSSFGQGAITWISDKHSVRTPISVIFK 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60434g00035 766 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Stsc60434g00035 766 PRINTS Subtilisin serine protease family (S8) signature 158 177 IPR015500 -
Stsc60434g00035 766 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Stsc60434g00035 766 Pfam Fibronectin type-III domain 665 763 IPR041469 -
Stsc60434g00035 766 SUPERFAMILY Subtilisin-like 134 622 IPR036852 GO:0004252|GO:0006508
Stsc60434g00035 766 Gene3D Peptidase S8/S53 domain 160 631 IPR036852 GO:0004252|GO:0006508
Stsc60434g00035 766 Pfam Subtilase family 158 587 IPR000209 GO:0006508|GO:0008236
Stsc60434g00035 766 CDD Peptidases_S8_3 140 585 IPR034197 -
Stsc60434g00035 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 32 135 IPR037045 -
Stsc60434g00035 766 CDD PA_subtilisin_like 363 476 - -
Stsc60434g00035 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 49 763 IPR045051 -
Stsc60434g00035 766 ProSiteProfiles Serine proteases, subtilase domain profile. 142 618 - -
Stsc60434g00035 766 Pfam PA domain 385 470 IPR003137 -
Stsc60434g00035 766 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 163 174 IPR023827 -
Stsc60434g00035 766 Gene3D - 635 765 - -
Stsc60434g00035 766 Pfam Peptidase inhibitor I9 48 135 IPR010259 -
Stsc60434g00035 766 Gene3D - 353 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60434g00035 Stsc-Chr60434 185580 188040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60434g00035 15 766 Subtilisin-like Serine Gene Family AT1G04110 42.013 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60434g00035 - - gmx:100783595 1094.72