Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60432g00023 ATGGCGGGCGGCAAAGTTATTGTTGCTGCAGTTTCTATCATCCTTGTAGTTGGTGTTGTCATTGGCACCATTGCCATTGTTAACAACACCAGCAACAACCAGCCATTGAAAACCCACAACAAGGCTGTGGAGCAATTGTGCCAAAACGCAGATGACAAGAAACTTTGCCATGACGTCATCGGGAATGTCAATTCCACAGACCCAAAGGAATACGTCTCAGAAGTGGTGAAGAGAACAATGGACATTGTCATCAAGGCAGCTAACATGAGTGATACCCTCTCCGTGGAGCATGGCCAGAGTGAGCCTGGCATGAAGATGGCTCTAGAAGATTGCAAGGATTTGTTGCAATCCGCGATGCACGAACTCGAGGCCTCTATCAACCTTGTCAATGATAACAATTTCGCAAATGTTTACCGGAGTTCCGCAGAGCTCAAGAACTGGTTGGGTGCTGTCATTGCCTACCAGCAATCTTGCATGGACGGCTTCGACACGGACGGCGAGAAGAAGGTCCAATCCGAGTTGAAGGCTGATAGTTTGGACAGCGTTGGCAAGTTCACCGCACTTGCTCTTGATGTTGTTTCCGGATTGTCTCACTTTCTTAACGGTTTAGATTTGAACTTGAACCTCAAACCTGCATCTAGAAAGCTCCTTGAGGTGGATGAGGAGGGATACCCAACTTGGTTGTCCGCAGCCGATCGCAAACTCTTGGCGAACGTAAATAACGTTAAACCTAACGTTGTTGTCGCCAAGGATGGTAGTGGTCAGTTTAAGACAGTCTTGGAAGCTATTAACTCTTACCCTAAGAACTTCCAAGGTAGATACATTATCTACGTTAAGGCTGGCGTTTATGATGAGTACATTACCGTTGACAAGAAGTTCAAGAACATGTTTATCTATGGTGATGGAAACACAAAAACCATCATCACTGGTCGCAAGAACTTCCATGAGGGTACCAAGACAATGAGAACCGCCACTTTCTCTACCAATGCTGATGATTTCCTTGCCAAGTCAATTGCATTCGAAAACACCGCCGGTGCTGAAGGTCACCAGGCAGTGGCACTCCGTGTACAAGGTGACCGCTCAGCCTTCTTTGATTGCGCAATGCGTGGTTACCAAGACACACTTTATGCCCATGCTCATCGCCAGTTCTACCACAACTGCGAAATCTCCGGTACCATCGACTTCATCTTCGGCTATGGCACCACCTTGATCCAAAACTCCAAGATCATCGTGAGGAAGCCTATGTCAAACCAGCAAAACATTGTGGTTGCTGACGGAACTGACCAGAAGAACATGCCTACCGGTATTGTCCTTCAAAATTGTGAGATCATGGCTGAACCCGCCCTCTACCCAGACAGGTTGACAGTGAGGACATTCTTGGCAAGGCCATGGAAGGCATTCTCAAGGGCAGTGTTCATTGAGAACAACATTGGTGATTTGATCCAGCCACAGGGTTACATCCCATGGAACCCACCAACTGAGGCGAACACTGACCATTGCTACTTTGCTGAGTTTGGAAACACTGGTGCTGGTGCCAATGCCCAAGCCAGAGCCAAATTTGCAAAGGGACTTATTAGCAAGAATGATGCTGCTAAATATCTTGCTGAGCCATGGATCCAAGCCAGCTCCTGGGTCCCAGCCACTGGCATTTCCTATGATGCTGGCTTCACCAAGGCTTAA 1680 0.4768 MAGGKVIVAAVSIILVVGVVIGTIAIVNNTSNNQPLKTHNKAVEQLCQNADDKKLCHDVIGNVNSTDPKEYVSEVVKRTMDIVIKAANMSDTLSVEHGQSEPGMKMALEDCKDLLQSAMHELEASINLVNDNNFANVYRSSAELKNWLGAVIAYQQSCMDGFDTDGEKKVQSELKADSLDSVGKFTALALDVVSGLSHFLNGLDLNLNLKPASRKLLEVDEEGYPTWLSAADRKLLANVNNVKPNVVVAKDGSGQFKTVLEAINSYPKNFQGRYIIYVKAGVYDEYITVDKKFKNMFIYGDGNTKTIITGRKNFHEGTKTMRTATFSTNADDFLAKSIAFENTAGAEGHQAVALRVQGDRSAFFDCAMRGYQDTLYAHAHRQFYHNCEISGTIDFIFGYGTTLIQNSKIIVRKPMSNQQNIVVADGTDQKNMPTGIVLQNCEIMAEPALYPDRLTVRTFLARPWKAFSRAVFIENNIGDLIQPQGYIPWNPPTEANTDHCYFAEFGNTGAGANAQARAKFAKGLISKNDAAKYLAEPWIQASSWVPATGISYDAGFTKA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60432g00023 559 Pfam Pectinesterase 245 541 IPR000070 GO:0030599|GO:0042545
Stsc60432g00023 559 Gene3D - 238 556 IPR012334 -
Stsc60432g00023 559 PANTHER PECTINESTERASE 13 546 - -
Stsc60432g00023 559 FunFam Pectinesterase 239 556 - -
Stsc60432g00023 559 SUPERFAMILY Pectin lyase-like 243 554 IPR011050 -
Stsc60432g00023 559 Pfam Plant invertase/pectin methylesterase inhibitor 42 190 IPR006501 GO:0004857
Stsc60432g00023 559 CDD PMEI-like_3 46 197 - -
Stsc60432g00023 559 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Stsc60432g00023 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 197 IPR035513 -
Stsc60432g00023 559 NCBIfam pectinesterase inhibitor domain 24 176 IPR006501 GO:0004857
Stsc60432g00023 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 191 IPR035513 -
Stsc60432g00023 559 SMART PMEI_2 38 192 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60432g00023 Stsc-Chr60432 159606 162213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60432g00023 4 556 Carbohydrate Esterase AT2G47030 37.966 1.24e-130 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60432g00023 K01051 - gmx:100808559 833.558