Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60432g00019 ATGTGCCAAAACGCTGAGAACAAAACTCTTTGCCATGAGATCTTGAACCCCGTGAAGGACGCCACTGACCCCAATGAATTCATTGCAGCTGTAGTGAAAGCCGCCACGGAAAGCGTCATCAAGGCCTTGAATATGAGTGACAGGCTGACGGTTGAAAAAGGAAGCAACAGCCCAGGCATAAAGATGTCACTGGATGATTGCAAAGACCTTTTGCAATCAGCCCTACACAGCCTTGAAGCTTCCACATCCTTGGTGGAACAGAATAATATCAAGGCACTTCATGACCAGTCCGCCGACTTCAGGAACTGGCTAGGCGCTGTCATCTCCTACCAACAAACTTGCCTTGACAACTTCAACGAAACCGATGTCGAAGGCGAGAAGGCCATCAAGGATCAGCTTAACGCCGAGAGCCTAGACGAAATTATGAAGGTAACAGGAGTCGCCCTTGATTTGGCCGCCGACTTGGACAGGATCCTCGAGCAGTTCAACTTGAGACTCGATGTCCATCCCGGTTCTCGCCGCCTTCTGGCCTTGGATGTCGACCAGCAAGGACTCCCTACCTGGCTCTCTGAGTCAGACCGGGAGCTCTTGGCTAAAGTCGACCTCCACTTGGCTAGAAGGGACTTAGGCAGTAAAAAAGTGGGGAATGGAAAAGGAGGAAAAGGAAAAGGTAAGGGTAAAGGCAAGGGCAAAGGCAAAGCTATGGCTGCTGGTGCTGCCGCCGGTGCTACTGCTGGTGCTGCTGCAGTTACTTTCTCTCCTGGATCCATTGAACCAGTGACCCCGGGACCAGCCCACGTGGTGGTTGCTCAGGATGGAAGTGGGAGATTCAAGACTATCACTGAAGCTATTAATTCTTACCCAGCTGGCTTTAAGGGCAGATACGTCATTTACGTTAAGGCTGGTATCTATAACGAGTTCATTATTATTCCTAAGACCGCAGTCAACATTCTTATGTACGGTGATGGCCCTACAAGGACCATTGTCACTGGCCGTAAAAACTTTGCTGAAGGAGTGAAAACAATGCATACCTCCACATTTGCCAATACTGCTGATGGGTTCATTGCGAAGGGAATGAGGTTCGAAAACACTGCTGGTCCCAAAGGACACCAAGCTGTGGCACTCCGAAACCAGGGAGACAAATCAGCTTTCTTCCAATGCCATATCTTCGGTAACCAAGACACCTTGTACGTCCAAACCAACCGCCAGTTCTTCCGTGATTGCGAGATCTCCGGCACCATCGACTTCATCTTCGGCACATCCGCAACCTTGATCCAAAACTGCAAGATCATCATCAGGAAGCCTGACCCTAAACAATCCAACACCGTTACCGCCGACGGCACAACGCAAGTCAACATGCCCACCGGAATCGTCCTCCAGAACTGCGAGATTGTCCCGGAGCCCGCCCTCTTCCCCGATAGGTTCACCATCAAGTCATACTTGGGTAGGCCATGGAAGCCTTACTCAAAGACTGTGATCATGGAATCAATGATCAGCGATGCAATTCACTCTGATGGGTGGTTCCCTTGGGCTGGAACCGTACACCTTGATACTCTGTACTATGCTGAGTTTGCTAATACTGGACCTAGTTCCAATGTTCAAGGAAGGATTAAGTGGAAGGGCTATCAAGGACTCATTAGTAAGGATGTGGCTGCAAGGTACACTGCTGGTAGATTTCTAGGAGCTGGACCTACTAGCAATGCTGAACAATGGTTGGGTGCTACTGGCCTTCCTTTTACCATTGGCTTTACCAAGGCTTAA 1761 0.498 MCQNAENKTLCHEILNPVKDATDPNEFIAAVVKAATESVIKALNMSDRLTVEKGSNSPGIKMSLDDCKDLLQSALHSLEASTSLVEQNNIKALHDQSADFRNWLGAVISYQQTCLDNFNETDVEGEKAIKDQLNAESLDEIMKVTGVALDLAADLDRILEQFNLRLDVHPGSRRLLALDVDQQGLPTWLSESDRELLAKVDLHLARRDLGSKKVGNGKGGKGKGKGKGKGKGKAMAAGAAAGATAGAAAVTFSPGSIEPVTPGPAHVVVAQDGSGRFKTITEAINSYPAGFKGRYVIYVKAGIYNEFIIIPKTAVNILMYGDGPTRTIVTGRKNFAEGVKTMHTSTFANTADGFIAKGMRFENTAGPKGHQAVALRNQGDKSAFFQCHIFGNQDTLYVQTNRQFFRDCEISGTIDFIFGTSATLIQNCKIIIRKPDPKQSNTVTADGTTQVNMPTGIVLQNCEIVPEPALFPDRFTIKSYLGRPWKPYSKTVIMESMISDAIHSDGWFPWAGTVHLDTLYYAEFANTGPSSNVQGRIKWKGYQGLISKDVAARYTAGRFLGAGPTSNAEQWLGATGLPFTIGFTKA 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60432g00019 586 CDD PMEI-like_3 1 157 - -
Stsc60432g00019 586 Pfam Pectinesterase 266 561 IPR000070 GO:0030599|GO:0042545
Stsc60432g00019 586 NCBIfam pectinesterase inhibitor domain 1 133 IPR006501 GO:0004857
Stsc60432g00019 586 MobiDBLite consensus disorder prediction 211 231 - -
Stsc60432g00019 586 Pfam Plant invertase/pectin methylesterase inhibitor 1 151 IPR006501 GO:0004857
Stsc60432g00019 586 SUPERFAMILY Pectin lyase-like 264 581 IPR011050 -
Stsc60432g00019 586 PANTHER PECTINESTERASE 1 573 - -
Stsc60432g00019 586 ProSitePatterns Pectinesterase signature 2. 410 419 IPR033131 -
Stsc60432g00019 586 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 157 IPR035513 -
Stsc60432g00019 586 SMART PMEI_2 1 151 IPR006501 GO:0004857
Stsc60432g00019 586 FunFam Pectinesterase 261 583 - -
Stsc60432g00019 586 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1 132 IPR035513 -
Stsc60432g00019 586 Gene3D - 264 583 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60432g00019 Stsc-Chr60432 138958 141682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60432g00019 1 583 Carbohydrate Esterase AT3G05610 33.390 1.26e-111 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60432g00019 K01051 - mnt:21397036 469.544