Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60432g00018 ATGGCTCCAAGAAAACTCTTTGTGTCTGGTCTTTCCTTGTTACTGGTGGTGAGTGTTGCCATTGGCGTCGTTGTTGCCCACGACAACAAGGGCGGTTCTGATGGAGAACACGAAAAAACGGTGAACTCAATGTGCTCTGGAACAGATGAGCAAAAGCTTTGCCAGGAAACGCTCAAGGATGTTCAGGCCAACGGATCCGATCCGAAGGCCTACATCGCGGCGGCGCTGGAAGCAACCACCAAGAGTGTGATTAAGGCTTTGAACATGAGTGATAGACTCTCAGTGGATCATGGCCATAAAAGCCCGGGAGTGAAGATGGCCCTTGATGACTGTAAAGATTTGATGGAATTTGCCCTAGATAGTATAGAGGCATCCGTCAATTTGGTACAAAATAAAGACATGCAAGGCGTTCATGAACAGACACCTGATTTCAGGAACTGGCTCAGTGCTGTTATCTCGTACCAACAATCTTGCATGGAAGGTTTTGACGAGAAACATGATGGTGAGGCGAAAGTGAAAGAACAGTTGCATACTCAAAGCTTGGACCTCATGGGCAAACTCACTGCCATAACCCTTGATATTGTCACCGGTTTCGCTAATGTTCTTGAAAGCTTTGGGTTGGCGTTGGATTTGAAACCTGCATCTCGCCGCCTCATGCAGGCAAACGAGGTGGATGCAGAAGGGTTCCCGGGTTGGATGTCTGCCGCGGATCGGAAGCTCATGGCTACTGGCGGCCACCATGGCGGTAGAGGCGGCCACCACGGCGGAGGTGGTGGACCAAATGCTGTGGTTGCTAAAGATGGAAGTGGTCAATTTAAGACCGTTAAGGATGCTATTAACTCATACCCGAATGGCTTCAAAGGAAGATATGTTATTTACATTAAGGCTGGGGTTTATGATGAGTATATTACCATTCCCAAGACTGCAGCAAATATTCTTATGTATGGTGATGGCCCAACAAAGACCATTATCACTGGTCACAAGAACTTTGTAGATGGTGTGAAGACAATGCAGACAGCTTCCTTCGCCAACACTGCACCAGGGTTCATTGCAAAGTCCATGGCGTTCGAGAACTCTGCGGGTTGGGCAAAACACCAAGCAGTGGCCTTCCGAAACCAAGGAGACATGTCGGCTTTCTACGACGTGGCCTTCCATGGTTACCAAGACACCCTTTACGTCCAAGCCAACCGTCAATTCTTCAGAAACTGCGAGATCTCCGGCACCATCGACTTCATCTTCGGCGCATCCGCCACCGTAATCCAAAACTCGAGGATCATAGTGAGGAAGCCAGGTCCCCACCAATTCAACACCGTCACGGCAGACGGCACGTCACAGAAGAACATGGCAACGGGCATCATTCTCCAGAACTGCGAGATCATACCGGAGAGGGAACTGTACCCCGACAGACTGACAGTGAAATCATACCTTGGAAGGCCATGGAAACAGTATGCAAAGACGGTGGTTATGGAATCCAACATTGGTGACGTGATTTCACCTGACGGATGGGCTCCTTGGGAAGGATCCCAGTTTCTTGATACATTGTACTATGCAGAGTATAACAACATGGGACCTGGTTCTAATGTTCAAGGAAGGGTTAAGTGGAAAGGTTACCACCCAACCATTGATAAGAACCAAGCTGCAGCATTCACTGTTGGACAGTTTCTCAGAGCTGGACCCTCTGGCCTTGCTGACGATTGGTTGAAGGCAACTGGTATTCCTTTCGACATTGGATTCACAAAAGCTTAA 1746 0.4874 MAPRKLFVSGLSLLLVVSVAIGVVVAHDNKGGSDGEHEKTVNSMCSGTDEQKLCQETLKDVQANGSDPKAYIAAALEATTKSVIKALNMSDRLSVDHGHKSPGVKMALDDCKDLMEFALDSIEASVNLVQNKDMQGVHEQTPDFRNWLSAVISYQQSCMEGFDEKHDGEAKVKEQLHTQSLDLMGKLTAITLDIVTGFANVLESFGLALDLKPASRRLMQANEVDAEGFPGWMSAADRKLMATGGHHGGRGGHHGGGGGPNAVVAKDGSGQFKTVKDAINSYPNGFKGRYVIYIKAGVYDEYITIPKTAANILMYGDGPTKTIITGHKNFVDGVKTMQTASFANTAPGFIAKSMAFENSAGWAKHQAVAFRNQGDMSAFYDVAFHGYQDTLYVQANRQFFRNCEISGTIDFIFGASATVIQNSRIIVRKPGPHQFNTVTADGTSQKNMATGIILQNCEIIPERELYPDRLTVKSYLGRPWKQYAKTVVMESNIGDVISPDGWAPWEGSQFLDTLYYAEYNNMGPGSNVQGRVKWKGYHPTIDKNQAAAFTVGQFLRAGPSGLADDWLKATGIPFDIGFTKA 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60432g00018 581 FunFam Pectinesterase 258 578 - -
Stsc60432g00018 581 CDD PMEI-like_3 43 200 - -
Stsc60432g00018 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 198 IPR035513 -
Stsc60432g00018 581 FunFam Pectinesterase 37 199 - -
Stsc60432g00018 581 MobiDBLite consensus disorder prediction 243 263 - -
Stsc60432g00018 581 NCBIfam pectinesterase inhibitor domain 11 195 IPR006501 GO:0004857
Stsc60432g00018 581 Pfam Plant invertase/pectin methylesterase inhibitor 40 194 IPR006501 GO:0004857
Stsc60432g00018 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 196 IPR035513 -
Stsc60432g00018 581 SMART PMEI_2 36 194 IPR006501 GO:0004857
Stsc60432g00018 581 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
Stsc60432g00018 581 PANTHER PECTINESTERASE 17 568 - -
Stsc60432g00018 581 SUPERFAMILY Pectin lyase-like 260 576 IPR011050 -
Stsc60432g00018 581 Pfam Pectinesterase 261 556 IPR000070 GO:0030599|GO:0042545
Stsc60432g00018 581 Gene3D - 259 578 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60432g00018 Stsc-Chr60432 133526 135818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60432g00018 35 581 Carbohydrate Esterase AT2G26450 39.020 1.08e-134 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60432g00018 K01051 - gmx:100775246 825.083