Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60432g00017 ATGAGTTGTTTTGCCTGTTGTGAAGAGGATGATTACTCCAAGCCTGCAGAAAATGGAGGACATTATGCCGTGAAAAACCCAGCAGGGAATGATGGAAACTATCATTCTTCAGAAACCGCAAAACCTCAGACCGTTAAAGTCCGGCCGATTGAAGTTCCTGCTATACCGGCAGATGAACTAAAAGAAATTACAAATAATTTTGCACAAGAGGCTCTGGTTGGAGAGGGATCATATGGAAGAGTATATCATGGTGTTCTTAAAAGTGGACAGGACACCGCAATCAAGAAGTTAGATGCCAGTAAACAACCAGATGATGAATTTTTAGCCCAAGTTTCAATGGTATCAAGGCTGAAGCATGAAAATTTTGTTCAGTTGCTTGGTTATTGTATCGATGGAGGTTCCAGAGTTCTTGCTTATGAGTTTGCAGCTAATGGGTCTCTTCATGATATATTACATGGCAGAAAAGGCGTAAAAGGAGCAATGCCAGGCCCAATGTTGACATGGGCACAGAGAGTGAAAATTGCTGTAGGGGCTGCAAGAGGGCTTGAATACTTGCATGAGAAGGCTGATCCCCACATTATCCACAGGGACATCAAATCAAGCAATGTACTAATCTTTGACGATGATGTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCTGCACGTCTTCATTCTACTCGTGTCCTTGGGACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGGCAATTGAATGCTAAGAGTGATGTTTACAGTTTTGGTGTTGTCCTTCTTGAACTTTTGACCGGAAGGAAACCCGTTGATCATACACTACCACGCGGACAGCAGAGTCTGGTTACTTGGGCTACACCAAAACTCAGTGAGGATAAAGTCAAGCAGTGTGTTGATCCCAAACTTGGAGCAGAATATCCACCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCGCTTTGTGTTCAATATGAAGCTGATTTTAGACCAAACATGAGTATTGTAGTCAAAGCTCTTCAACCTTTGTTGACGGCACGACCGGCACCTGCTGGTGACACACCTAATTAA 1080 0.4324 MSCFACCEEDDYSKPAENGGHYAVKNPAGNDGNYHSSETAKPQTVKVRPIEVPAIPADELKEITNNFAQEALVGEGSYGRVYHGVLKSGQDTAIKKLDASKQPDDEFLAQVSMVSRLKHENFVQLLGYCIDGGSRVLAYEFAANGSLHDILHGRKGVKGAMPGPMLTWAQRVKIAVGAARGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDPKLGAEYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLTARPAPAGDTPN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60432g00017 359 Gene3D Transferase(Phosphotransferase) domain 1 143 352 - -
Stsc60432g00017 359 CDD STKc_IRAK 73 346 - -
Stsc60432g00017 359 ProSiteProfiles Protein kinase domain profile. 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60432g00017 359 Gene3D Phosphorylase Kinase; domain 1 30 141 - -
Stsc60432g00017 359 FunFam PTI1-like tyrosine-protein kinase 3 32 141 - -
Stsc60432g00017 359 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Stsc60432g00017 359 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 351 - -
Stsc60432g00017 359 SUPERFAMILY Protein kinase-like (PK-like) 42 343 IPR011009 -
Stsc60432g00017 359 FunFam pto-interacting protein 1 143 354 - -
Stsc60432g00017 359 PIRSF ILK 13 351 - -
Stsc60432g00017 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Stsc60432g00017 359 SMART serkin_6 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60432g00017 359 Pfam Protein tyrosine and serine/threonine kinase 71 343 IPR001245 GO:0004672|GO:0006468
Stsc60432g00017 359 MobiDBLite consensus disorder prediction 16 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60432g00017 Stsc-Chr60432 126577 129983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60432g00017 59 350 Receptor kinase-like Gene Family AT3G58690 50.340 1.74e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Stsc60432g00017 PK_Tyr_Ser-Thr 7.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60432g00017 K13436 - tcc:18613791 644.425