Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60432g00015 ATGGTTAGTGCTGATGAACAACGCATGCATGTAATGCTTTCTAAGAAGTTGTTGGTTCTATTAATTCTACTCTCATCAGTTTCATGTTCATTGGGTTCAGCATCTCTGACAGTGGGTTTCTATAAAAGAACATGTCCACATGCTGAAGCAATTGTGAGAAGCACTGTCAACAAAGCCATTTCCCTTAACCCGGGAATTGCTCCTGCCTTGATTAGAATGCACTTTCACGATTGCTTTGTGAGGGGTTGTGATGGTTCCATATTACTAGAATCCACTCCAGGAAACCCAGCTGAGAGAGAACACCCAGCCAACAACCCAAGTCTACGTGGCTTTGACGTCATCCAAGAAGCCAAGGCCCAAATAGAGTCCATCTGCCCCGAAACGGTGTCGTGCGCCGACATTCTCGCCTTCGCCGCACGCGACAGCGCCTACAAATCCGGAGCCTTCAACTACGCCGTACCCGCAGGCCGCCGAGACGGCCGAGTCTCCATCAGCCAAGAAGTAACACAAAACCTGCCCGCACCAAGCTTCAACGCAACACAACTCATAACTAACTTCGCAAGAAAAGGCCTTTCCGTTGATGAAATGGTTACGCTCTCCGGAGCGCATTCCATTGGTGTATCTCATTGTTCTTCATTCTCCAACCGCTTGTATACACCCGCGCCTCAAGACCCTACCATGGACTCCGAGTTTTCGTCGTTCTTGAAAACCACGTGTCCTAATTCCGGCGGTGGATTATTTGATCCGACTGTTGTGCTTGACGCATTTACGCCGAAGAGGTTGGATAATAAGTACTACAGGGGATTGATGAAGCAGCGCGGGTTGTTGAGTTCGGATCAAGCGTTGTGGAGTAGTGGATCAACGAGGAAAATGGTGGTGAGAAATGCTAAACATGGTTTGAATTGGTCAGTGAAGTTTGCCAAGGCTATGGTTCGTATGGGGTCCATTGATGTGCTCACAGGTGAAGAAGGTGAGATTAGGAGGCAGTGTAACTTTGTTAATTAA 1005 0.4806 MVSADEQRMHVMLSKKLLVLLILLSSVSCSLGSASLTVGFYKRTCPHAEAIVRSTVNKAISLNPGIAPALIRMHFHDCFVRGCDGSILLESTPGNPAEREHPANNPSLRGFDVIQEAKAQIESICPETVSCADILAFAARDSAYKSGAFNYAVPAGRRDGRVSISQEVTQNLPAPSFNATQLITNFARKGLSVDEMVTLSGAHSIGVSHCSSFSNRLYTPAPQDPTMDSEFSSFLKTTCPNSGGGLFDPTVVLDAFTPKRLDNKYYRGLMKQRGLLSSDQALWSSGSTRKMVVRNAKHGLNWSVKFAKAMVRMGSIDVLTGEEGEIRRQCNFVN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60432g00015 334 Gene3D - 39 334 - -
Stsc60432g00015 334 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Stsc60432g00015 334 ProSiteProfiles Plant heme peroxidase family profile. 35 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 FunFam Peroxidase 173 313 - -
Stsc60432g00015 334 CDD secretory_peroxidase 36 333 IPR033905 GO:0004601|GO:0042744
Stsc60432g00015 334 SUPERFAMILY Heme-dependent peroxidases 36 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 FunFam Peroxidase 39 181 - -
Stsc60432g00015 334 Pfam Peroxidase 52 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Stsc60432g00015 334 Gene3D Peroxidase, domain 2 173 313 - -
Stsc60432g00015 334 PANTHER PEROXIDASE 25-RELATED 23 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60432g00015 334 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60432g00015 Stsc-Chr60432 119242 121183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60432g00015 17 334 Peroxidase AT4G11290 46.154 1.03e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60432g00015 K00430 - qsa:O6P43_010907 444.121