Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60431g00033 ATGTACCACCCAAACAACTCATTAGTTTGTGATCACCCCATGGATTGTGTTGCCACTGCAATGGATCCTGTTAATGGAGGTAACAGTCTAGCTTCCAAGCAGCGCTTACGCTGGACCAATGACCTCCATGAACGCTTCGTCGACGCCGTTGCTCAACTTGGTGGCCCGGATCGTGCCACACCTAAAGGTGTACTCAGAGTTATGGGTGTGAAAGGGTTGACTATATACCATGTCAAAAGTCATTTACAGAAATATCGACTAGCAAAATACCTACCTGACTCCTCATCTGATGGGAAAAACTCTGAGAAGAAAGAAACGGGGGATATACTTTCTAACCCTGATGGTTCAGCTGGGATGCAAATTACTGAAGCACTTAAGCTTCAAATGGAGGTGCAGAAGCGACTACACGAGCAATTAGAGGTGCAGAGACAACTACAACTAAGGATAGAAGCCCAGGGTAAATACTTGAAGAAGATTATTGAAGAGCAGCAGCAGCTCAGTGGTGTTCCTACAGTAGCACCTGATTCGGTGGCAGAAGCTCTGGTTCCAGGAGTTGCGCACCAAGAAGTTGATAACAAGACCGACCCAGCAACCCCTGCCACAACCTCTGAGTGCCCCCTTTTGGAGATAGCTACAAAAGAACAAGCCCCAGCCAAGAGTCTCTCAATTGATGAATCCTTTTCATCTCAGCATGTACCGTTGACACCTGATTCTGGTTGCCATGTTGTCAACCCCACCGAAACCTCTGAAGGGGAGAGATCAACAAAGAAGCAGCGGGTGAGCATAGATGGATCATATTCTAGACCAGAAATGGTGCTTCCGCATCACTTAGTGGAGTCAAGCATCTCATCATACCAGCAACCAAATGGGTATACCTGCAAGAAGTGA 888 0.4707 MYHPNNSLVCDHPMDCVATAMDPVNGGNSLASKQRLRWTNDLHERFVDAVAQLGGPDRATPKGVLRVMGVKGLTIYHVKSHLQKYRLAKYLPDSSSDGKNSEKKETGDILSNPDGSAGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQQLSGVPTVAPDSVAEALVPGVAHQEVDNKTDPATPATTSECPLLEIATKEQAPAKSLSIDESFSSQHVPLTPDSGCHVVNPTETSEGERSTKKQRVSIDGSYSRPEMVLPHHLVESSISSYQQPNGYTCKK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60431g00033 295 Gene3D - 32 91 - -
Stsc60431g00033 295 MobiDBLite consensus disorder prediction 219 269 - -
Stsc60431g00033 295 MobiDBLite consensus disorder prediction 91 116 - -
Stsc60431g00033 295 FunFam Myb family transcription factor 32 90 - -
Stsc60431g00033 295 Pfam MYB-CC type transfactor, LHEQLE motif 119 165 IPR025756 -
Stsc60431g00033 295 SUPERFAMILY Homeodomain-like 32 87 IPR009057 -
Stsc60431g00033 295 Coils Coil 122 142 - -
Stsc60431g00033 295 NCBIfam myb-like DNA-binding domain, SHAQKYF class 33 88 IPR006447 GO:0003677
Stsc60431g00033 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 90 IPR017930 -
Stsc60431g00033 295 Pfam Myb-like DNA-binding domain 36 86 IPR001005 -
Stsc60431g00033 295 MobiDBLite consensus disorder prediction 219 249 - -
Stsc60431g00033 295 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 22 287 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60431g00033 Stsc-Chr60431 159242 215788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60431g00033 68 289 G2-like Transcription Factor Family AT2G01060 62.332 3.64e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc60431g00033 Myb_DNA-binding 6.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60431g00033 - - aip:107637104 446.432