Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60431g00032 ATGGATTGTGTTGCCACTGCAATGGATCCTGTTAATGGAGGTAACAGTCTAGCTTCCAAGCAGCGCTTACGCTGGACCAATGACCTCCATGAACGCTTTGTCGACGCGGTTGCTCAACTTGGTGGCCCAGATCGTGCCACACCTAAAGGTGTACTCAGAGTTATGGGTGTGAAAGGGTTGACTATATACCATGTCAAAAGTCATTTACAGAAATATCGACTAGCAAAATACCTACCTGACTCCTCATCTGATGGGAAAAACTCTGAGAAGAAAGAAACGGGGGATATACTTTCTAACCCTGATGGTTCAGCTGGGATGCAAATTACTGAAGCACTTAAGCTTCAAATGGAGGTGCAGAAGCGACTACACGAGCAATTAGAGGTGCAGAGACAACTACAACTAAGGATAGAAGCCCAGGGTAAATACTTGAAGAAGATTATTGAAGAGCAGCAGCAGCTCAGTGGTGTTCCTACAGTAGCACCTGATTCGGTGGCAGAAGCTCTGGTTCCAGGAGTTGCGCACCAAGAAGTTGATAACAAGACCGACCCAGCAACCCCTGCCACAACCTCTGAGTGCCCCCTTTTGGAGATAGCTACAAAAGAACAAGCCCCAGCCAAGAGTCTCTCAATTGATGAATCCTTTTCATCTCAGCATGTACCGTTGACACCTGATTCTGGTTGCCATGTTGTCAACCCCACCGAAACCTCTGAAGGGGAGAGATCAACAAAGAAGCAGCGGGTGAGCATAGATGGATCATATTCTAGACCAGAAATGGTGCTTCCGCATCACTTAGTGGAGTCAAGCATCTCATCATACCAGCAACCAAATGGGTATACCTGCAAGAAGTGA 849 0.47 MDCVATAMDPVNGGNSLASKQRLRWTNDLHERFVDAVAQLGGPDRATPKGVLRVMGVKGLTIYHVKSHLQKYRLAKYLPDSSSDGKNSEKKETGDILSNPDGSAGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQQLSGVPTVAPDSVAEALVPGVAHQEVDNKTDPATPATTSECPLLEIATKEQAPAKSLSIDESFSSQHVPLTPDSGCHVVNPTETSEGERSTKKQRVSIDGSYSRPEMVLPHHLVESSISSYQQPNGYTCKK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60431g00032 282 Coils Coil 109 129 - -
Stsc60431g00032 282 Pfam MYB-CC type transfactor, LHEQLE motif 106 152 IPR025756 -
Stsc60431g00032 282 MobiDBLite consensus disorder prediction 206 236 - -
Stsc60431g00032 282 Pfam Myb-like DNA-binding domain 23 73 IPR001005 -
Stsc60431g00032 282 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 19 274 IPR044848 GO:0003700
Stsc60431g00032 282 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Stsc60431g00032 282 Gene3D - 19 78 - -
Stsc60431g00032 282 MobiDBLite consensus disorder prediction 206 256 - -
Stsc60431g00032 282 FunFam Myb family transcription factor 19 77 - -
Stsc60431g00032 282 SUPERFAMILY Homeodomain-like 19 74 IPR009057 -
Stsc60431g00032 282 MobiDBLite consensus disorder prediction 78 103 - -
Stsc60431g00032 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60431g00032 Stsc-Chr60431 159241 162001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60431g00032 55 276 G2-like Transcription Factor Family AT2G01060 62.332 2.08e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc60431g00032 Myb_DNA-binding 6.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60431g00032 - - aip:107637104 446.432