Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60431g00030 ATGCGAATGGTGATTGAGGATGTTGCAATATCACCGGCAACTGCGGCGGATGAGGTTACGGAGACGGTTGCCAGCAAAGAGGAGCAGGCGGCAGGGCTCGGAATTCTGCTTCAGATCATGATGCTGGTGTTGGCTTTCGTGCTTGGCCATGTCCTCCGCCGCAAGAAGATTTACGTGGTTCCCGAGGCCAGCGCCTCCCTCCTCATCGGCCTGCTTGTTGGCGTCCTCGCCAACATCTCCCATACTCAGACCAGCATCAGATCTGGTTTCAGCCTCGCACCCGAACCCTTCTTCTCTAATTTTGGAGCCATTATCACCTTTGCTATATTCGGTACCTTTCTAGCTTCTGTTGTAACTGGTGTTCTTGTCTTCATTGGTGGATTTGTACACCTCGTGTACGGACTACCTTTCGTTGAGTGCCTAATGTTTGGTGCTCTTATCTCCGCGACTGACCCTGTTACCGTCCTTTCCATATTTCAGGAGCTTGGCACTGATGTCAATTTGTATGCCTTGGTTTTTGGAGAGTCTGTTCTCAATGATGCTATGGCTATTTCATTATACAGAACAATGTCACTGGTTAAAACTCATCCATCTGGACAGAACTTCTTCATGGTGGTTGTTAGATTCTTGGAGACTTTTGTTGGCTCCATGTCTGCTGAAGGTCTTGGCTTGTCTGGTATTGTATCAATATTGTTCACGGGAATGGTCATGAAGCACTACACTTATTCAAATTTGTCTAGAAGTTCCCAGAGATTTGTCTCTTCTTTCTTCGACTTAATATCATCATTAGCAGAGACATTTGTGGCAGCCAATGTCTTTTGTTGCGCTTATCTGATCAATTTGGTCAGACCTCAACACCAAAAGATACCAGAAAAACACCAGAAAGCACTATGGTATAGTGGACTTCGAGGAGCAATGGCCTTTGCCCTTGCTCTACAATCAGTTCATGATCTTCCTGAAGGACATGGACAGACCATATTCACTGCAACTACAGCAATTGTCATGTTGACGGTGTTGCTGATTGGTGGTTCAACGGGCACCATGCTTGAAGCTTTAGAAGTTGTAGGTGGTGAAATTAATAGCAAGGAGAGCCCTTTGCCTTCAGCTGATACCACAACAAAACTTGAGGAAAGCAATGGCTATGTTTCTCCTCACAATGAAGAATTATCACCGGGGAGCAAAATCAAGTTGAAGCTACGACAGCTCAACAGTGCTGCATCTTTTAAAGCATTAGATAAGAACTACCTTACTCCATTCTTTACAAGTCAAAATGAACATGAAGAAGAAGAAGTTGAGCTTCTGGCTTCTAGAAGTGCGGGATTCCATGATACCCAACAAGAACATTATTCTCTGTGA 1356 0.4499 MRMVIEDVAISPATAADEVTETVASKEEQAAGLGILLQIMMLVLAFVLGHVLRRKKIYVVPEASASLLIGLLVGVLANISHTQTSIRSGFSLAPEPFFSNFGAIITFAIFGTFLASVVTGVLVFIGGFVHLVYGLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVKTHPSGQNFFMVVVRFLETFVGSMSAEGLGLSGIVSILFTGMVMKHYTYSNLSRSSQRFVSSFFDLISSLAETFVAANVFCCAYLINLVRPQHQKIPEKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVMLTVLLIGGSTGTMLEALEVVGGEINSKESPLPSADTTTKLEESNGYVSPHNEELSPGSKIKLKLRQLNSAASFKALDKNYLTPFFTSQNEHEEEEVELLASRSAGFHDTQQEHYSL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60431g00030 451 PRINTS Na+/H+ exchanger signature 104 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc60431g00030 451 PRINTS Na+/H+ exchanger signature 89 103 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc60431g00030 451 PRINTS Na+/H+ exchanger signature 144 154 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc60431g00030 451 Gene3D - 137 189 - -
Stsc60431g00030 451 MobiDBLite consensus disorder prediction 362 390 - -
Stsc60431g00030 451 Pfam Sodium/hydrogen exchanger family 42 216 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc60431g00030 451 PANTHER SODIUM/HYDROGEN EXCHANGER 217 268 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Stsc60431g00030 451 MobiDBLite consensus disorder prediction 364 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60431g00030 Stsc-Chr60431 145893 150035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60431g00030 25 420 Antiporters AT3G05030 25.919 5.47e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60431g00030 K14724 - gmx:100790830 593.193