Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60431g00015 ATGGAGGAAAGAGGAGGAACCATTCTGATGCAAAGGTATGAGGTGGGGCGCATGCTTGGCCAAGGAAACTTTGCTAAAGTTTATCATGCAAGGAACCTCAAGACAGGGCAGAGTGTTGCAATCAAAGTCCTTAATAAGGACATGATCACCAGGTTTGGCATGGCTGAGCAAATCAAGCGCGAAATCTCCGTGATGCGGCTCGTGAGGCACCCCAACATTGTGCATCTCTACGAGGTGATGGCAAGCAAGACCAAGATATACTGCGTCATGGAGTATGTCAAAGGTGGTGAGCTTTTTGACAAGGTGTCCGTAGGGAGGTTGAAGGAAGATCTGGCCAGAAAATATTTCCAGCAATTGATAGATGCCATTGATCTCTGCCACAGCAGAGGGGTGTATCACCGCGACCTCAAGCCGGAGAACCTTCTCTTGGACGAAAATGGCAACCTCAAGGTCACAGACTTCGGCCTTAGCGCCTTGATGGATTGCAGAAAGAGTGATGGCCTTCTTCACACAACTTGTGGAACTCCGGCTTATGTGGCGCCGGAGGTGATTAGGAAGAAAGGCTACGACGGAGCCAAGGCAGATATTTGGTCTTGTGGTGTAATTCTATATGTTCTGTTGGCTGGATATCTTCCTTTCCGTGATAAGAATCTCATTGAAATGTATAGAAAGATTGCCAAAGCAGATTTCAAGTGCCCTCAATGGTTCCCTCTAGATGCTAAAAGGCTTCTCTACAGGATTCTTGATCCTAATCCAACAACCAGAGTTACTATCCCCAGAATCATGGAGAGTAGATGGTTCCAAAAGGGGTATGAGCACAATGCAGTATCCTATCTGCCACCTTTGTCCCCGAGATGGCGTGGCGATGAATGTACCTCTGATGTTGAGGCTGCATTTACATTTACCTCCTCCAACTCTTCTTCCTTCTCTTCAACAGAAGAAGAGGAAGAGGTAACCGTTCCCATGAAGCTGTATCGCTTCAATGCGTTTGATATCGTAGCACTCTCCTCAGGGTTTGATCTCTCTGGATTGTTTGAGAAAGATAACAATCAGAGACAGCATGCAATGTTTATAACAAGCATGCCGCCGTCAGTAATTGCATCAAAGCTGGAGGAGATAGGACAGATGGATAATAATAGTTTTAAGGTGATGAGGAATAATGGAGTTATTAGGTTGGAAAGAAGAAATTCAAAGGGAGCCAGCCAACTCAGCATAGATACAGAGATTTTTCAAGTTACAGAATCCTTTCATGTTGTTGAGATCAACAAGGTTCTTGGGGACTCATTGGAATACAACACATTCTGGGAACACCATCTTAAGCCTTTCCTTGATGAAGTTGTTTCGGCTTGGCAAGGATGTCCACCAACAGAGGACCAAAAGCAATTGAATTCAGCAACATACATTTGA 1407 0.4513 MEERGGTILMQRYEVGRMLGQGNFAKVYHARNLKTGQSVAIKVLNKDMITRFGMAEQIKREISVMRLVRHPNIVHLYEVMASKTKIYCVMEYVKGGELFDKVSVGRLKEDLARKYFQQLIDAIDLCHSRGVYHRDLKPENLLLDENGNLKVTDFGLSALMDCRKSDGLLHTTCGTPAYVAPEVIRKKGYDGAKADIWSCGVILYVLLAGYLPFRDKNLIEMYRKIAKADFKCPQWFPLDAKRLLYRILDPNPTTRVTIPRIMESRWFQKGYEHNAVSYLPPLSPRWRGDECTSDVEAAFTFTSSNSSSFSSTEEEEEVTVPMKLYRFNAFDIVALSSGFDLSGLFEKDNNQRQHAMFITSMPPSVIASKLEEIGQMDNNSFKVMRNNGVIRLERRNSKGASQLSIDTEIFQVTESFHVVEINKVLGDSLEYNTFWEHHLKPFLDEVVSAWQGCPPTEDQKQLNSATYI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60431g00015 468 CDD CIPK_C 328 444 - -
Stsc60431g00015 468 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Stsc60431g00015 468 ProSiteProfiles Protein kinase domain profile. 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60431g00015 468 FunFam Non-specific serine/threonine protein kinase 5 92 - -
Stsc60431g00015 468 Gene3D Transferase(Phosphotransferase) domain 1 6 326 - -
Stsc60431g00015 468 Pfam NAF domain 327 383 IPR004041 GO:0007165
Stsc60431g00015 468 FunFam Non-specific serine/threonine protein kinase 7 305 - -
Stsc60431g00015 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Stsc60431g00015 468 CDD STKc_SnRK3 12 266 - -
Stsc60431g00015 468 SMART serkin_6 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60431g00015 468 ProSiteProfiles NAF domain profile. 322 346 IPR018451 GO:0007165
Stsc60431g00015 468 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 433 - -
Stsc60431g00015 468 Pfam Protein kinase domain 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60431g00015 468 FunFam Non-specific serine/threonine protein kinase 322 449 - -
Stsc60431g00015 468 Gene3D Kinase associated domain 1, KA1 327 448 - -
Stsc60431g00015 468 SUPERFAMILY Protein kinase-like (PK-like) 9 316 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60431g00015 Stsc-Chr60431 74818 77075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60431g00015 3 452 CBL-interacting serine-threonine protein kinases AT5G45820 58.407 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc60431g00015 Pkinase 8.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60431g00015 K07198 - gmx:100807927 596.66