Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60430g00038 ATGGCGAATCGCTGGTGGACCGATCCGGTGGGTCTTGCCGGAGTAGACAACTCCACCAACTCTCCGATGAAGAAACCCGATCTAGGATTCTCCATCATGAACAACCAACCTGCATCTGCTCCTCCGCCCATCAACAACAACAACGAAGAACAAGACGACAACAACAGCGAGGACCCCAAGGAAGGAGCAATCGAAGTCTCCGCCACGCGCCGCCCTAGGGGCCGCCCTCCCGGCTCCAAGAACAAGCCCAAGCCGCCCATCTTCGTCACCAGAGACACCCCTAACGCTCTCCGAAGCCACGTCATGGAGGTTGCTAACGGAGCTGACATCACCGATAGCTTGCTTCAGTTCGCAAGGAAGCGTCAGAGAGGGGTCTGCGTCCTCAGCGCCACCGGAACCGTCGCCAACGTCACTCTCCGGCAGCCAACTGCTCCCGGCGCCGTCATGGCACTCCATGGCCGATTCGAGATCATATCTTTAACAGGCTCGTTCCTTCCGGGGCCTTCGCCGGCGGGGTCGTCGGGGCTGACGGTGTACCTGGCTGGAGGGCAAGGGCAGGTGGTGGGCGGCGGAGTGGTGGGGCCCCTTGTTGCGTCCGGATCAGTTATGATAATGGCGGCTACGTTTTCGAATGCAGTTTATGAGAGATTGCCGATTGAGCAGGAGGAGGATCAAGTTCAAGAAGGAGGAGGTGGGCAGGGTGAGGGTGAAGTGGGTCCTGGTGGTGGGTCTCCGGCGGGGTTAGGTGGTTCCGGCGGGGAGGGTTATATGGTTGGTCAGGTGAGCCATGAAGGTAGTTCTTGGGGTCATGCAAGGGCACCACCCTTTTGA 831 0.5945 MANRWWTDPVGLAGVDNSTNSPMKKPDLGFSIMNNQPASAPPPINNNNEEQDDNNSEDPKEGAIEVSATRRPRGRPPGSKNKPKPPIFVTRDTPNALRSHVMEVANGADITDSLLQFARKRQRGVCVLSATGTVANVTLRQPTAPGAVMALHGRFEIISLTGSFLPGPSPAGSSGLTVYLAGGQGQVVGGGVVGPLVASGSVMIMAATFSNAVYERLPIEQEEDQVQEGGGGQGEGEVGPGGGSPAGLGGSGGEGYMVGQVSHEGSSWGHARAPPF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60430g00038 276 FunFam AT-hook motif nuclear-localized protein 97 225 - -
Stsc60430g00038 276 MobiDBLite consensus disorder prediction 32 50 - -
Stsc60430g00038 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 223 - -
Stsc60430g00038 276 MobiDBLite consensus disorder prediction 1 91 - -
Stsc60430g00038 276 Gene3D - 97 227 - -
Stsc60430g00038 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 98 211 IPR005175 -
Stsc60430g00038 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 46 248 IPR014476 GO:0003680
Stsc60430g00038 276 MobiDBLite consensus disorder prediction 223 276 - -
Stsc60430g00038 276 CDD DUF296 98 181 IPR005175 -
Stsc60430g00038 276 ProSiteProfiles PPC domain profile profile. 94 230 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60430g00038 Stsc-Chr60430 201725 203024 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60430g00038 1 276 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 55.116 2.51e-89 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60430g00038 - - mnt:21407274 304.293