Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60430g00033 ATGTGCGAAGCCTTGCTGAGACGATACCAATTGCTGGAGGAGATTGGTCGTGGTAGATTCGGGACTGTGTTTCGCTGCTTCGACCGTAACTCCGGTGACATTCTCGCATGCAAGGTTATCGATAAGGCTCTTCTTCTTGACCCAACAGATCGTGCTTGCATCGATAACGAATCAAAGTTCATGACTTTTCTTTCCCCACACCCTAACATTGTCCAGATTTTCGGAGCCTATGAGGATTCCGATTCTCTCTCCATCGTCGCCGAGCTTTGCGAGCAAGAAACCCTATTCGACCGAATTGCCGATCGGCCTTTGCCGGAGGTAGAGGCCGCCGCCGTAATGAAACAGCTTCTTGAAGCGCTGGCGCATTGCCACAGGCTAGGGATAGCGCACAGGGACATCAAGCCAGATAATTTGCTTTTCGATCGAAGGGGGAATCTCAAAGTTGCGGACTTTGGTTCGGCGGAGTGGTTCGGCGACGGAAGAGGGATGAGTGGGGTGGTGGGGACGCCGTATTACGTGGCGCCGGAGGTGGTGATGGGGAGGGAATACAGTGAGAAAGTTGATGTTTGGAGCTCCGGTGTGATTCTTTACATTATGTTGGGTGCGATTCCACCGTTCTATGGAGAGGATGCTTCTGAGATTTTTGAAGCTGTTGTTAGGGCTAATCTTAGATTCCCAACTAGCATCTTTAGGTCTGTTTCTTCTTCTGCTAAGGATCTTCTCAGAAAGATGATTTGCAAGGATCCTTCTAGGAGAATCTCAGCTGAGCAAGCTTTGAGTAAGCTTTTTTTTAGTCACCTGGGGAATGGGGATCTTTGTTTGTTGTCAAAGTTTTCAACTTTTTGGTCACGAGGATCTGGGGTTTTTTCAATCTGA 876 0.4874 MCEALLRRYQLLEEIGRGRFGTVFRCFDRNSGDILACKVIDKALLLDPTDRACIDNESKFMTFLSPHPNIVQIFGAYEDSDSLSIVAELCEQETLFDRIADRPLPEVEAAAVMKQLLEALAHCHRLGIAHRDIKPDNLLFDRRGNLKVADFGSAEWFGDGRGMSGVVGTPYYVAPEVVMGREYSEKVDVWSSGVILYIMLGAIPPFYGEDASEIFEAVVRANLRFPTSIFRSVSSSAKDLLRKMICKDPSRRISAEQALSKLFFSHLGNGDLCLLSKFSTFWSRGSGVFSI 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60430g00033 291 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60430g00033 291 PIRSF ILK 3 263 - -
Stsc60430g00033 291 Gene3D Transferase(Phosphotransferase) domain 1 2 275 - -
Stsc60430g00033 291 CDD STKc_CAMK 8 260 - -
Stsc60430g00033 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Stsc60430g00033 291 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60430g00033 291 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Stsc60430g00033 291 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 260 - -
Stsc60430g00033 291 FunFam Maternal embryonic leucine zipper kinase 2 272 - -
Stsc60430g00033 291 SUPERFAMILY Protein kinase-like (PK-like) 6 273 IPR011009 -
Stsc60430g00033 291 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60430g00033 Stsc-Chr60430 174788 176262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60430g00033 2 259 EF-hand Containing Proteins AT2G38910 43.130 8.89e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Stsc60430g00033 Pkinase 3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60430g00033 - K08794 qsa:O6P43_007686 399.823