Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60430g00006 ATGGATTGGGGTTTTGTGCATAAAACGTGGGATAAGTGGGCTTCCTCTAACATTGGTCATTCTGGTCACCCTTTAAAAGCTGCTTTCTTGATTAATTATGACCCAACTGGACCTTCTCGCTTGTTATCTACCATTGCTGAGCAAGAAGGAATCAAAGCCAACCCCATGGAGTTGACTCACTTTCTAGACTTCATCAAGCGCAACCAGCTCCAATCAGAAACCTTCGTCATTGGCTCCAATGAGTACTTGGTGACCTCGATTCACGAGAATTGGTTTAGTGGAAGGTGCATAAACACATCAAAGCCTGCTGGTGAAGGTGCAATTGTTATTCAAACGGCAGCATATATCTTAGTTGCTTTGTATGAAGGTTCCATTGGTCCGGCATCTCGAGCTATGGCGGCTGCTGATCAGTTAACTTGGCAATTAGGAAGGAAAAATCTTTAG 444 0.4392 MDWGFVHKTWDKWASSNIGHSGHPLKAAFLINYDPTGPSRLLSTIAEQEGIKANPMELTHFLDFIKRNQLQSETFVIGSNEYLVTSIHENWFSGRCINTSKPAGEGAIVIQTAAYILVALYEGSIGPASRAMAAADQLTWQLGRKNL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60430g00006 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
Stsc60430g00006 147 Pfam Profilin 9 142 IPR005455 GO:0003779
Stsc60430g00006 147 Gene3D Dynein light chain 2a, cytoplasmic 9 146 - -
Stsc60430g00006 147 SUPERFAMILY Profilin (actin-binding protein) 10 133 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60430g00006 Stsc-Chr60430 47790 49228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60430g00006 1 147 Carbohydrate Esterase AT4G19410 67.568 4.98e-70 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60430g00006 - K19882 gmx:100811973 281.567