Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60429g00042 | ATGAAGTGTTTCTCTACTTGTTTCTCTATCAAACAAGAAACCAAACAAGAAGAAGTAGACTGGAATAAGGGTGATGATGGTGATGGAAGCTTTCGGGTGTTCAGTTACAGGGAATTGTCATCAGCCACCCGTGGCTTTCATCCCTCTCTCAAAATTGGTGAAGGAGGTTTTGGCTCTGTCTACAAGGGGGTGCTCCGGGATGGGACATTGGTGGCAGTGAAAGTGCTTTCCATAGAGGTGGAGTCCATGAGAGGGGAGAGGGAGTTTGTGGCTGAATTGGCTACTCTTGCAAATATCAAGCACCAAAACTTGGTCATTCTTAGAGGCTGTTGTGTAGAAGGAACAAAGAGATATCTAGTCTATGATCACATGGAGAATAACAACCTTTACCACACTTTCTTAGGTTCGGAGAAAAGTAGGATGAGATTCAATTGGGAAGCAAGAAAGGATGTGTCCATAGGTGTGGCCTCTGTTCTTGCTTTTCTTCATGAGGAACTTAAGCCTCATATTCTCCATAGAGATATCAAATCAAGCAACATCCTTCTTGATCGAGATTTCACACCCAAGGTCTCGGATTTCGGCCTCGCCAAGCTACTCAGAGATGAAAAGTCCTATGTCAGCACTCGAGTTGCTGGCACATTGGGCTATCTTGCTCCGGAGTATGCTAGTTCCGGACAAGTTTCGCGAAAATCAGATGTTTACAGTTTTGGAGTGCTGCTCTTAGAAATTGTTAGTGGAAGATCAGTGGTTGGTGTTTATCACGACATGGAACGTTTCATAGTAGAGAAGGCTTGGGCAGCATATGGAGAAAATGATGTGTTAAAAATGGTTGATCCAGTGTTAGATATGAAGTATCCTGTGGAGGAAGCAAAACGGTTCGTGATGGTGGGTTTGCTTTGTGTCCAAGAAACTGCAAAGCTTAGGCCACGGATGGCAGAGGTTGTAGAGATGTTGAAGAACAAGAAGGACATGGAAGGTGTTCAGATTTCGAAACCGGGTTTTGTTGAGGATCTAAGGAGCATTAGAATCAGGCAGCAGCAGCAAGTAGTAATGCATTCATCAGAAGAAGCTGCAACAAGTTCTTTATTGACTACCTCTACTCTTGCTCGTTAG | 1113 | 0.4403 | MKCFSTCFSIKQETKQEEVDWNKGDDGDGSFRVFSYRELSSATRGFHPSLKIGEGGFGSVYKGVLRDGTLVAVKVLSIEVESMRGEREFVAELATLANIKHQNLVILRGCCVEGTKRYLVYDHMENNNLYHTFLGSEKSRMRFNWEARKDVSIGVASVLAFLHEELKPHILHRDIKSSNILLDRDFTPKVSDFGLAKLLRDEKSYVSTRVAGTLGYLAPEYASSGQVSRKSDVYSFGVLLLEIVSGRSVVGVYHDMERFIVEKAWAAYGENDVLKMVDPVLDMKYPVEEAKRFVMVGLLCVQETAKLRPRMAEVVEMLKNKKDMEGVQISKPGFVEDLRSIRIRQQQQVVMHSSEEAATSSLLTTSTLAR | 370 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60429g00042 | 370 | Gene3D | Phosphorylase Kinase; domain 1 | 7 | 123 | - | - | |
Stsc60429g00042 | 370 | Gene3D | Transferase(Phosphotransferase) domain 1 | 124 | 332 | - | - | |
Stsc60429g00042 | 370 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 30 | 360 | - | - | |
Stsc60429g00042 | 370 | SMART | serkin_6 | 46 | 318 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc60429g00042 | 370 | Pfam | Protein kinase domain | 49 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc60429g00042 | 370 | CDD | STKc_IRAK | 52 | 320 | - | - | |
Stsc60429g00042 | 370 | ProSiteProfiles | Protein kinase domain profile. | 46 | 334 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc60429g00042 | 370 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 124 | 330 | - | - | |
Stsc60429g00042 | 370 | FunFam | Serine/threonine-protein kinase receptor | 13 | 123 | - | - | |
Stsc60429g00042 | 370 | SUPERFAMILY | Protein kinase-like (PK-like) | 28 | 330 | IPR011009 | - | |
Stsc60429g00042 | 370 | ProSitePatterns | Protein kinases ATP-binding region signature. | 52 | 74 | IPR017441 | GO:0005524 | |
Stsc60429g00042 | 370 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 170 | 182 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60429g00042 | Stsc-Chr60429 | 234206 | 236341 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60429g00042 | 34 | 321 | Receptor kinase-like Gene Family | AT1G53430 | 48.276 | 1.12e-88 | 285 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Stsc60429g00042 | Pkinase | 7e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60429g00042 | - | - | gmx:100813945 | 497.664 |