Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60429g00033 ATGGAAGGCATTAATCAATCGCTTGCATCTGAGTCTTCCTCTGCATCAGAATCAAGTATCCAGATTTTGGATGATGACGACCATGATTATATTCCAAGGGATGGGATGAATTTTCATACACTTGAAGACGCTTCTGCTTTTTACAAAGAGTATGCTAAACGTGTTGAATTTTCTACTAAGATAAGGAACACTAATAGGTGCAAGGAGACCAAGGAAATAAAGAACCAACTCATCACATGTAATAGGGAGGGGAAATGGATTTCTGATATACTGTGTGTGGAGAAGACGAATCCTACATGTGGTGCAAACTGTCCTGCAAGGATTTATGCGCACATAATGAAGAAAACGTTACGCTAG 357 0.395 MEGINQSLASESSSASESSIQILDDDDHDYIPRDGMNFHTLEDASAFYKEYAKRVEFSTKIRNTNRCKETKEIKNQLITCNREGKWISDILCVEKTNPTCGANCPARIYAHIMKKTLR 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60429g00033 118 Pfam FAR1 DNA-binding domain 47 111 IPR004330 -
Stsc60429g00033 118 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60429g00033 Stsc-Chr60429 196024 196795 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc60429g00033 FAR1 2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60429g00033 - - adu:110280446 112.079