Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60428g00046 ATGGCAATGAAGAAGCCGATGTTTTTTGCATTTGCATTTGCATGCTTAGTTTCTGGTGTTTTCTCCTATGGATCTGAGCCACTCTCTGTGCTTTCTTTCTTGGAAAACGGTGCCGTTTCAGCCAAGCCTTCTTCATCATCATACCAACCTCTCATGGTTAATCTCACTCTCATTCATGGAGCTGCTTCAACAGGAGCTGTTTGTTTGGATGGAACGTTACCGGGTTACCACTTGGACCGTGGATTTGGATCCGGCGCAAATAGCTGGCTTATTCACTTAGAGGGAGGAGGGTGGTGTAATACTGTCAGAAACTGCGTCTACAGAAAAAATACTCGCCGTGGTTCCTCGAAATACATGGAAAGTCAAATACAATTCACTGGAATATTGAGCAATAAAGCAGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGTGATGGGGCATCTTTCAGTGGTGATAGTGAACTTGAGTCCGAACAACTTCAATTCCGAGGACAAAAAATATGGCTAGCTGCAATTGAGGAATTGATGTTCCAAGGAATGCAGACAGCAGACCAGGCACTTCTATCAGGATGCTCTGCTGGCGGTCTAGCATCTCTAATACATTGCGATGAGTTCCGGAGTTTGTTTCCAGCATCTACCAAGGTTAAATGTTTGAGTGATGCAGGGTTTTTCCTTGATGCAGTTGATGTCTCTGGGAACCGAACGCTGCGGAATCTGTTTGGAGGTGTAGTTCAGTTACAGGATGTACAAAAGAACCTGCCGAAAAGTTGCCTCGACCAATTGGATCCTACTTCGTGCTTCTTTCCTCAGAATATGGTCCACCATATTGAGACTCCACTGTTTCTACTCAATGCAGCCTATGATGCCTGGCAGGTCCAAGCCAGTTTAGCCCCACCTTCAGCTGACCCGAATGGCCTTTGGAGTGACTGCAAAGCAAACCATGCGAATTGTAACTCGTCTCAGATTCAGTTCCTCCAAGACTTCAGAGATCAATTGCTAAACGAGTTGAAAGACTTCTCAAGTACACCTCAAACTGGGCTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTNNNNNNNNNNAGAGACATGGTTTGCTGATAACTCTCCTCTTCTTGACAACAAGCCAATTGCAATTGCTGTGGGAGACTGGTATTTTGATCGAGAAGTAG 1191 0.44 MAMKKPMFFAFAFACLVSGVFSYGSEPLSVLSFLENGAVSAKPSSSSYQPLMVNLTLIHGAASTGAVCLDGTLPGYHLDRGFGSGANSWLIHLEGGGWCNTVRNCVYRKNTRRGSSKYMESQIQFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSELESEQLQFRGQKIWLAAIEELMFQGMQTADQALLSGCSAGGLASLIHCDEFRSLFPASTKVKCLSDAGFFLDAVDVSGNRTLRNLFGGVVQLQDVQKNLPKSCLDQLDPTSCFFPQNMVHHIETPLFLLNAAYDAWQVQASLAPPSADPNGLWSDCKANHANCNSSQIQFLQDFRDQLLNELKDFSSTPQTGLFINSCFAHCQSXXXXRHGLLITLLFLTTSQLQLLWETGILIEK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60428g00046 396 PANTHER NOTUM-RELATED 34 365 IPR004963 GO:0016787
Stsc60428g00046 396 Pfam Pectinacetylesterase 48 366 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60428g00046 Stsc-Chr60428 278106 282777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60428g00046 52 364 Carbohydrate Esterase AT3G62060 71.246 5.71e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60428g00046 K19882 - gmx:100786972 617.461