Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60428g00037 ATGGATGAGAAAGTTAAGTCAAAGACTGAAGAAATCTGTTTGGAGCAAAATGACAGGAAGAAGGAGAAGCATATGAAGAAAAAGAAAATTCATGAAAATGATAAAACACACAATTCAGATAAAATTCTTGAGGCAAATTGTATTGATGCTGCTGCTGATTCTACGGGGAATAGGGAAGAAGATGGCAACATCAGTAAGAAATTGAAGAAAAAAGGGACAAAGGATGCTGAAGCGGTACGTAATGCATTTCGCGATGATAAAGTATTGCAGGGAATGGATGACAACCAAAAAAGCAAGAAGAAGAGAAAAAATGGCAGTGATTCATTAACTGGAATGCAAGAAATGGGTTCTTCAAAACCAAACAAAAGAGGAAAAGTTAACGGGGATTACGACTTACAGGACCATGTGGGTGATTCTCCTTTGGACAGAATCAGTACTGGAGATGCTAATGCACATTCTCTTGTCAATGAAGTTGATGATCAAGGTAAGAAGATGGAGAAGAAGAAGAAAAATAAGAAGGAGAAGGAGCTGAGTGAAAAAGGTGATACGGAAAGTGTTGTAGCTGATATTTCTTTGCTCAAAAGCAATGAAGGTGAAGATCATCAAGGCAAGAAGATGAAGAAGAAACTGAGCAATAAAGGCAAAAGTAAGGAGAAAGGTAAGTTTAAAGGCAATGAAGATGATCAACATTGCGCCAAAGGCAACGAAGGTGAAGACGATAGCCTAGGCAAGCAAAGGAAGAAGAAATTGAGCAATAAAAGCAAAAGTAAGGAGAAAAGTGAGTTTAAAAGAAACAAAGATGATCAGCATTGTGCGAATGGCAATGAAGGTGGCAATGATAACCTGGGCAAGAAGATGAAGAATGGTAAACAGAGTGAAGAAAGCACAAGTAAGGAGAGCAATGAAGTTAATGATCAAGGAAAGAAGACGAAGATAAACAAAAAAACAAAGGAAGGCACCACATCCAAACCCAAACGAGTAACATTTTCTGATGAAGTGGAGGTCTGCTGTGATGGCTTAATACGTGGGAAGAGGTTTACACCTGAAGAAGATGAAAAAATTAAACAGGCTGTTTTCGACTATATAGAGTCTCACCAATTGGGGGATGAAGGTATTGATATGGTTCTTAATTCTAGATCTCATCCTGAACTTAAACATTGTTGGAAGGAAATTGGAGCAGCCTTGTCCCATAGGCCTTACACAAGTGTATATAAGCGTGCTTATATTTTGTTTACAAGGGATGAGAAACGCAAATGGACTGCTGAAGAGATTGAGTTTTTAAAGAAGATGGCTGCACAACATGGAAATGATTGGAAATCAATAGCTGACGCAATGGGTAAAAATCGAGTTCATGTGAAGGATGCATGGCGGAGAAATAAAAGGCCCGTAAAGAATGGACCATGGTCTCAGGATGAGTATCAAAAGATATTTGATTTGGTAAGCCTGGACCTACGAGCAAGGGCTTTAGAAGACACTAGGAAAAAAATGCATGGTATGTTGCGAGATAATATTGGTTGGGAGGCAATTGGTGACAAATTGGGAACTAGAAGGAATGCAGATGTTTGTAGAAAGTGGTATTCTCAACTAACATCTCCTATGGTTGAGCAAGGTCACTGGAGTGATACTGACGACTACCGCTTGATAGATGCCTTATTTGCCTTGGATGCTTGCAGCATGGATGAGGTAGACTGGGACAATTTGCTTGAGCACAGGGACGGTGAGCTATGCAGAAAACGATGGAATCAAATGGTTCGATATATTGGAGAGCATGGGAGAAAATCATTCACTGAGCAGGTGGAAATTCTTGCAAAAAGATATTGCCCTGATTTATTGGAAGCAAGAGAAGCCTTTGATAGCAAACCTGTCGTTTGTTGA 1875 0.3952 MDEKVKSKTEEICLEQNDRKKEKHMKKKKIHENDKTHNSDKILEANCIDAAADSTGNREEDGNISKKLKKKGTKDAEAVRNAFRDDKVLQGMDDNQKSKKKRKNGSDSLTGMQEMGSSKPNKRGKVNGDYDLQDHVGDSPLDRISTGDANAHSLVNEVDDQGKKMEKKKKNKKEKELSEKGDTESVVADISLLKSNEGEDHQGKKMKKKLSNKGKSKEKGKFKGNEDDQHCAKGNEGEDDSLGKQRKKKLSNKSKSKEKSEFKRNKDDQHCANGNEGGNDNLGKKMKNGKQSEESTSKESNEVNDQGKKTKINKKTKEGTTSKPKRVTFSDEVEVCCDGLIRGKRFTPEEDEKIKQAVFDYIESHQLGDEGIDMVLNSRSHPELKHCWKEIGAALSHRPYTSVYKRAYILFTRDEKRKWTAEEIEFLKKMAAQHGNDWKSIADAMGKNRVHVKDAWRRNKRPVKNGPWSQDEYQKIFDLVSLDLRARALEDTRKKMHGMLRDNIGWEAIGDKLGTRRNADVCRKWYSQLTSPMVEQGHWSDTDDYRLIDALFALDACSMDEVDWDNLLEHRDGELCRKRWNQMVRYIGEHGRKSFTEQVEILAKRYCPDLLEAREAFDSKPVVC 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60428g00037 624 Pfam Myb-like DNA-binding domain 419 475 - -
Stsc60428g00037 624 MobiDBLite consensus disorder prediction 254 273 - -
Stsc60428g00037 624 MobiDBLite consensus disorder prediction 54 107 - -
Stsc60428g00037 624 MobiDBLite consensus disorder prediction 157 183 - -
Stsc60428g00037 624 ProSiteProfiles Myb-like domain profile. 411 460 IPR001005 -
Stsc60428g00037 624 Gene3D - 420 459 - -
Stsc60428g00037 624 ProSiteProfiles Myb-like domain profile. 531 584 IPR001005 -
Stsc60428g00037 624 MobiDBLite consensus disorder prediction 1 21 - -
Stsc60428g00037 624 MobiDBLite consensus disorder prediction 124 138 - -
Stsc60428g00037 624 MobiDBLite consensus disorder prediction 286 323 - -
Stsc60428g00037 624 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 416 464 IPR017930 -
Stsc60428g00037 624 Coils Coil 155 175 - -
Stsc60428g00037 624 PANTHER GB|AAC33480.1 17 623 - -
Stsc60428g00037 624 SMART sant 342 413 IPR001005 -
Stsc60428g00037 624 SMART sant 415 462 IPR001005 -
Stsc60428g00037 624 SMART sant 464 532 IPR001005 -
Stsc60428g00037 624 SMART sant 535 586 IPR001005 -
Stsc60428g00037 624 SUPERFAMILY Homeodomain-like 416 472 IPR009057 -
Stsc60428g00037 624 Gene3D - 460 534 - -
Stsc60428g00037 624 CDD SANT 418 460 IPR001005 -
Stsc60428g00037 624 MobiDBLite consensus disorder prediction 217 247 - -
Stsc60428g00037 624 MobiDBLite consensus disorder prediction 1 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60428g00037 Stsc-Chr60428 236367 238329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60428g00037 388 583 MYB-Related Transcription Factor Family AT3G18100 24.500 9.51e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc60428g00037 Myb_DNA-bind_6 5.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60428g00037 - - adu:107465053 903.279