Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60428g00018 ATGGAGAGCGTTTTTAGGAGAGAGGATGCATCAGACAAGATTACACAGTACTCATGTGATGTTGAAGAGGAATTCGTCCCAAAGGTTGGAATGTGGTTTGAAAGTGTTGAGGAAGCTGGGAAATTTTATAAGGAGTATGCGAAATGTGCAGGTTTCTCCACAAAGATAAGGAACTCAAATAGATGTAAGGAGACCAAAGAAATAAAGAACCAACTAATTACTTGCAATAGGGAAGGGAGATGGACATCTGAAGTACCTTGTGCAGAGAAGATGAATCCGATTTGTGGGGCAAATTGTCCAGCACGAATTTATGTTCACGTAGACAAGAAGACTCGAAATTGGTGTATTTCTAAAGTTGTTCTAAACCATTCACATCCATGCTGTCCCGATAAAGCTTAG 399 0.401 MESVFRREDASDKITQYSCDVEEEFVPKVGMWFESVEEAGKFYKEYAKCAGFSTKIRNSNRCKETKEIKNQLITCNREGRWTSEVPCAEKMNPICGANCPARIYVHVDKKTRNWCISKVVLNHSHPCCPDKA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60428g00018 132 Pfam FAR1 DNA-binding domain 41 128 IPR004330 -
Stsc60428g00018 132 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60428g00018 Stsc-Chr60428 114025 114843 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc60428g00018 FAR1 1.6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60428g00018 - K02941 aip:107646405 155.992