Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60428g00008 ATGGTAGGACTCACCCTTATTCAATCTGCTGCTGCCAAAGGAGCAGTTTGTTTGGATGGATCTTTGCCTGGTTACCATTTGCATAGAGGATATGGATCAGGAGCAAATAGCTGGATCATTAATCTAGAGGGAGGAGGATGGTGTAATGATGTCAGCTCATGCGTTTATCGCAAGAAAACACGGCGCGGATCTTCGGCATTCATGGAAAGGGAGATACCTTTTACAGGAATATTAAGCAATAAGGCTGAACAAAATCCAGACTTTTTCAACTGGAACAGAGTGAAGATTCGTTATTGTGATGGTGCTTCTTTTGCTGGGGACAGTGAACATAAGGCTGCACGCTTGCAATTCCGAGGACAACGCATTTGGATGGCTGCAATGGAGGATCTGATGTCAAAGGGAATGCGTTTTGCCCGGCAGGCTCTACTTTCCGGATGCTCGGCTGGTGGTCTCGCTACCATCATACACTGTGATGAATTTCGAGGTCTGTTTCCAAGGAATACCAAAGTGAAGTGTCTTAGTGATGCTGGGCTATTTCTTGATGCGAGAGACATATCTGGTGGACATACACTCAGGAATTTTTTCAGTGGTATCGTAGGGTTGCAGGGAGTACAGAGGAATCTGCCGCGAACTTGCACCAATCACCTTGATCCCACATCGTGCTTCTTCCCTCAGAACTTGATTGCCGGTATAAGAACCCCACTCTTCATTCTCAACACTGCCTATGATTCATGGCAGATCCAGTCAAGCTTAGCTCCTACGACAGCCGACCCGAGTGGCAATTGGCATGACTGTAGAAAAAACTATTATAGGTGTTCTGGTTCACAGATCCAGTTTCTGCAAGCTTTCAGGAATGAAATGTTGAATTCTATGAAAGGGTTCTCGAGATCAAATGAGAATGGAATGTTTATCAATTCTTGTTTTGCTCACTGCCAGTCTGAGAGGCAGGACACATGGTTTGCCGACAATTCTCCTGTCATTAGGGAAAAGGCAATTGCTCTGGCAGTTGGAGACTGGTTTTTCGACCGTGCAGTCGTTAAGGACATCGATTGTGCTTACCCTTGTGATAATACATGCCACAATCTGATCTTCAGATGA 1098 0.4545 MVGLTLIQSAAAKGAVCLDGSLPGYHLHRGYGSGANSWIINLEGGGWCNDVSSCVYRKKTRRGSSAFMEREIPFTGILSNKAEQNPDFFNWNRVKIRYCDGASFAGDSEHKAARLQFRGQRIWMAAMEDLMSKGMRFARQALLSGCSAGGLATIIHCDEFRGLFPRNTKVKCLSDAGLFLDARDISGGHTLRNFFSGIVGLQGVQRNLPRTCTNHLDPTSCFFPQNLIAGIRTPLFILNTAYDSWQIQSSLAPTTADPSGNWHDCRKNYYRCSGSQIQFLQAFRNEMLNSMKGFSRSNENGMFINSCFAHCQSERQDTWFADNSPVIREKAIALAVGDWFFDRAVVKDIDCAYPCDNTCHNLIFR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60428g00008 365 PANTHER NOTUM-RELATED 2 361 IPR004963 GO:0016787
Stsc60428g00008 365 Pfam Pectinacetylesterase 1 344 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60428g00008 Stsc-Chr60428 42907 47132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60428g00008 1 365 Carbohydrate Esterase AT1G57590 72.877 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60428g00008 K19882 - gmx:100793403 670.233