Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60427g00032 ATGGGCAAGGGCCCCTTCTCATTTCGCCGTTCTGCCTCTCGCCGCCGTCAGAGGAAGACCGTCATCCCCTCCGACTCCCCTCCCAATCCCAATGCCGCCTTGCTCTCCACCTTGTCCATCGACAGCGCCTTAATCGCCTCTGGCGGTACAATTTCCCTCCCCAAGGGGAAGAAGAAGACTGGCGGGGCCAGGCTGTGGATGCGATTTGACCGGACCGGGCGCTCCGAGATCGTGGAACTCGACAAGAACGCCATCATCCGCCATGCCGCAATTCCCGCCAGAGATCTCAGAATCTTGGGCCCTATCTTCTCCCACTCCTCCCATATTCTTGCTAGAGAGAAAGCAATGGTTGTTAACTTGGAGTTTATAAAGGCTATAGTCACAGCTGAAGATGTGCTATTGCTTGATCCTCTACGCCACGAGGTTCTTCCGTTTGTTGAACAACTCAGGCAACAGCTTCAACATAAAAATCAACCTAAACTTAGTGGGCTTGCAGGTGAACCAGAAAGCGAAATGCGGGTTTTGAGTAGTGGCAGACAATTGTTGCCTGTGCCAGAGTCTGCTGAAGGGTTTCAATCTGATGAGCTTCCATTTGAGTTTCAAGTTTTGGAGATTGCTTTAGAAGCTGTGTGTACCTCCCTGGAGTCAAGTGTTGGAGAACTCGAGAGAGATGCTTACCCTGTATTAGATGATTTGGCTAGGAATGTTAGTACCAATAATCTTGAACATGTGCGAAGTTTGAAGAGCAATCTTACTCGTTTGTTGGCACGAGTGCAGAAGGTACGCGATGAAATTGAGCATCTATTGGATGACAATGAAGACATGGCGCAACTATATTTGACAAGGAAGTGGCTGCAGAATCTGCAACTTGATGCTCATGTTGGGGCCACACCCTCCAACCACCCTTTAATTAGTACTCACACAAACAGCATCTTTGGAGAAGATAATGACGTGGAGGATCTGGAGATGTTACTTGAGGCGTATTTTATGCAGTTGGATGGAAGTCGCAACAAGATATTGTCGGTTAGGGAGTATATTGATGACACAGAAGACTATGTCAACATCCAACTTGATAATCAAAGAAATGAACTTATTCAGCTGAATTTGACATTGGTCATTGCGTCATTTGCAATGTCTATTGAAAATTTGGTGGCCGGCACATTTGGTATGAACATCCCTTGTTCACTATTTGAAGTAAATGGACTATTTTGGCCCTTTGTTTGGATCACTAATGCTGCTTCATTACTCCTTTTCTTGCTTATAATGGCATATGCAAAATCGATAAAATTGCTTGAGCCATAA 1302 0.4601 MGKGPFSFRRSASRRRQRKTVIPSDSPPNPNAALLSTLSIDSALIASGGTISLPKGKKKTGGARLWMRFDRTGRSEIVELDKNAIIRHAAIPARDLRILGPIFSHSSHILAREKAMVVNLEFIKAIVTAEDVLLLDPLRHEVLPFVEQLRQQLQHKNQPKLSGLAGEPESEMRVLSSGRQLLPVPESAEGFQSDELPFEFQVLEIALEAVCTSLESSVGELERDAYPVLDDLARNVSTNNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNLQLDAHVGATPSNHPLISTHTNSIFGEDNDVEDLEMLLEAYFMQLDGSRNKILSVREYIDDTEDYVNIQLDNQRNELIQLNLTLVIASFAMSIENLVAGTFGMNIPCSLFEVNGLFWPFVWITNAASLLLFLLIMAYAKSIKLLEP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60427g00032 433 FunFam magnesium transporter MRS2-4 141 364 - -
Stsc60427g00032 433 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 51 431 IPR039204 -
Stsc60427g00032 433 Gene3D Magnesium transport protein CorA, transmembrane region 139 364 - -
Stsc60427g00032 433 Gene3D - 51 137 - -
Stsc60427g00032 433 MobiDBLite consensus disorder prediction 1 29 - -
Stsc60427g00032 433 FunFam Magnesium transporter MRS2-1 54 137 - -
Stsc60427g00032 433 Coils Coil 244 278 - -
Stsc60427g00032 433 CDD Mrs2_Mfm1p-like 66 430 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60427g00032 Stsc-Chr60427 196862 199197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60427g00032 1 431 MRS2 Gene Family AT3G58970 60.444 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60427g00032 K16075 - gmx:100812561 602.438