Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60427g00031 ATGTCGCCCGGCGGCGACGGTGGCGCCATCGCGATGACGAAGGTGAAGAAGAAGGCGAGCGGAGCGAGGCTGTGGATGCGGTTTGATCGATCGGGGCGGTCGGAGCTGGTTGAGCTTGATAAGAACGCCATCATCCGCCACGCCGGAATTCCCACCAGGGACCTCAGGATCTTGGGCCCTGTCTTCTCCCAATCCTCCAATATTCTTGCTAGAGAGAAAGCTATGGTTGTCAATTTGGAGTTTATAAAGGCCATAGTGACAGCTGAAGACGTGCTATTGCTTGATCCTCTGCGCCAAGAGGTTCTTCCGTTTGTTGAACAACTGAGGCAACAAATTCCACATAAAACTCAACCTCAACTACTTCACGGGCCTGCTGGTGAACAAGAAAGTGATTCCGAGCTTCCATTTGAGTTTCAGGTTTTGGAGATTGCTTTAGAAGTTGTGTGTACCTCTCTCGACTCAAGTGTGGCTGACCTTGAGAGAGGTGCTTACCCTGTATTAGATGATTTGGCTAGAAGTGTTAGCACCAAGAATCTTGAACGTGTGCGAAGTTTGAAGAGCAATCTTACACGTTTGCTGGCACAGGTGCAGAAGGTACGAGATGAAATCGAACATCTGTTAGATGACAATGAAGACATGTTGCAACTATATTTGACAAGGAAATGGTTGCAGAATCAGCAACTACTAGATGCTCACGTGGGGGCCACAACCTCCAACAACCTCCTTTCTATTACTCGTCGATTTGGTTCTACCAGAAGTGGAAGTCTGGTAACTAGTAGTAACTTTGGGGTTGATAATAATGACGTTGAGGATCTGGAGATGTTGCTTGAGGCATATTTTGTGCAGTTAGATGGAACTCGTAACAAGATATTATCTGTTAGGGAGTATATTGATGACACAGAAGACTATGTCAACATCCAACTTGATAATCACAGAAACGAACTCATTCAGCTGCAGTTGACATTGACAATTGCATCATTTGCTATCTCTATTGAAACTTTGGTTGCCGGTACATTTGGTATGAACATTCACTGTTCACTATATGATGTACAAGGATTATTTGTGCCCTTTGTTTCGAGCGTTACTGCTGCTTGCTTCTTCATTTTTCTGCTTATAATGGCATATGCAAGATGGAAAAATTTGCTAGGATCATAA 1155 0.4468 MSPGGDGGAIAMTKVKKKASGARLWMRFDRSGRSELVELDKNAIIRHAGIPTRDLRILGPVFSQSSNILAREKAMVVNLEFIKAIVTAEDVLLLDPLRQEVLPFVEQLRQQIPHKTQPQLLHGPAGEQESDSELPFEFQVLEIALEVVCTSLDSSVADLERGAYPVLDDLARSVSTKNLERVRSLKSNLTRLLAQVQKVRDEIEHLLDDNEDMLQLYLTRKWLQNQQLLDAHVGATTSNNLLSITRRFGSTRSGSLVTSSNFGVDNNDVEDLEMLLEAYFVQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAISIETLVAGTFGMNIHCSLYDVQGLFVPFVSSVTAACFFIFLLIMAYARWKNLLGS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60427g00031 384 Gene3D - 9 95 - -
Stsc60427g00031 384 Gene3D Magnesium transport protein CorA, transmembrane region 96 315 - -
Stsc60427g00031 384 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 382 IPR039204 -
Stsc60427g00031 384 FunFam Magnesium transporter MRS2-1 13 96 - -
Stsc60427g00031 384 CDD Mrs2_Mfm1p-like 25 381 IPR039204 -
Stsc60427g00031 384 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 320 371 IPR045863 -
Stsc60427g00031 384 Coils Coil 182 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60427g00031 Stsc-Chr60427 193140 195665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60427g00031 7 384 MRS2 Gene Family AT3G58970 66.076 4.24e-178 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60427g00031 K16075 - gmx:100812561 570.852