Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60427g00022 ATGGAAAGCATTGCCGCGCAGCTGAAGCGCGGCATATCACGGCAATTCTCGTCAGGTTCGCTTCGTCGGAACATGAGTCGCCAGTTCACGAGGCAGGCGTCGCTGGACCCTCGCCGGAACAATCTCAGGTTCAGCTTCGGGAGGCAGTCGTCACTTGACCCGATCCGTCGGAGTCCGGTGACGCCGAGGGACGGGGAGGACGACCAAGGCGAGCTCACGGTGCCGGACAATCTTGATTCCACCATGCAGCTTCTGTTCATGGCGTGCAGAGGTGACGTTAAGGGCGTTGAGGACCTCCTCAACGACGGCATCGATGTTAATAGCATCGATCTCGACGGACGCACTGCGCTTCACATCGCCGCTTGTGAGGGCCACGTTGAGGTCTGCGCGCTCCTCCTCAGCCGCAAGGCTAACATCGACGCTCGTGACCGTTGGGGCAGCACGGCAGCGGCTGACGCCAAATATTATGGAAATACAGAAGTTTATTATATGCTGAAGGCTCGTGGAGCAAAAGTGCCGAAATCCAGGAAGACTCCAATGACTGTTGCAAATCCTCGTGAGGTTCCAGAATACGAACTCAATCCATTGGAACTCCAGGTTCGGAAGAGTGATGGAATTTCAAAGGGGATATATCAAGTAGCTAAATGGAATGGCACAAAGGTTGCAGTGAAGATACTAGATAAGGACAGTTATTCAGATCCTGATAGCATAAATGCCTTCAAGCATGAGCTCACCTTATTAGAAAGGGTACGGCATCCTAACATGGTCCAATTTGTTGGAGCTGTCACCCAAAATGTACCTATGATGATTGTGAGAGAGTACCATGCTAAGGGTGACCTTGCAAGTTATATTCAGAAGAAAGGCCGTTTATCCCTATCAAAAGTTCTACGGTTTTCTCTTGATATTGCTAGGGGAATGAACTATCTTCATGAATGCAAACCAGATCCAATTCTCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGTCAACTAAAGATAGCTGGGTTTGGAAATGTGAGATTATCGCATATCTCAGCTGATAAAGCAAAGCTGGCAGAGCCTGTTTCCAACATCGACCTTTTAAGCGTGTACTTGGCTCCAGAGATTTACAAAGATGAAGTATTTGACAGAAGCGCGGATGCATATTCTTTTGGTCTCATCTTATATGAGATGATTGAGGGTGTACAGCCCTTCCATCACCACTCTGCGGATGAGGCCTTGAGAATGATGTGCCTAGAAGGGAATAGACCACCATTCAAGGTCAAAGCAAAACATTATCCTCCGGATTTGAGAGAGTTGATTGAGGAATGTTGGGATCGGGAACCTGTTGTGAGGCCTACATTTTCTCAGGTCATTGTACGGTTAGACAAAATTGTTTCAAATTGTTCGAAACACGGATGGTGGAAAGATACCTTTAGACTTCCTTGGAAATAA 1446 0.4758 MESIAAQLKRGISRQFSSGSLRRNMSRQFTRQASLDPRRNNLRFSFGRQSSLDPIRRSPVTPRDGEDDQGELTVPDNLDSTMQLLFMACRGDVKGVEDLLNDGIDVNSIDLDGRTALHIAACEGHVEVCALLLSRKANIDARDRWGSTAAADAKYYGNTEVYYMLKARGAKVPKSRKTPMTVANPREVPEYELNPLELQVRKSDGISKGIYQVAKWNGTKVAVKILDKDSYSDPDSINAFKHELTLLERVRHPNMVQFVGAVTQNVPMMIVREYHAKGDLASYIQKKGRLSLSKVLRFSLDIARGMNYLHECKPDPILHCDLKPKNILLDNGGQLKIAGFGNVRLSHISADKAKLAEPVSNIDLLSVYLAPEIYKDEVFDRSADAYSFGLILYEMIEGVQPFHHHSADEALRMMCLEGNRPPFKVKAKHYPPDLRELIEECWDREPVVRPTFSQVIVRLDKIVSNCSKHGWWKDTFRLPWK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60427g00022 481 FunFam Integrin-linked protein kinase 1 47 191 - -
Stsc60427g00022 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Stsc60427g00022 481 SMART serkin_6 200 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60427g00022 481 ProSiteProfiles Ankyrin repeat region circular profile. 112 144 - -
Stsc60427g00022 481 FunFam serine/threonine-protein kinase STY46-like 193 276 - -
Stsc60427g00022 481 Gene3D Transferase(Phosphotransferase) domain 1 276 474 - -
Stsc60427g00022 481 SMART ANK_2a 80 108 IPR002110 GO:0005515
Stsc60427g00022 481 SMART ANK_2a 112 141 IPR002110 GO:0005515
Stsc60427g00022 481 Gene3D Phosphorylase Kinase; domain 1 195 275 - -
Stsc60427g00022 481 PRINTS Tyrosine kinase catalytic domain signature 430 452 IPR001245 GO:0004672|GO:0006468
Stsc60427g00022 481 PRINTS Tyrosine kinase catalytic domain signature 311 329 IPR001245 GO:0004672|GO:0006468
Stsc60427g00022 481 PRINTS Tyrosine kinase catalytic domain signature 272 285 IPR001245 GO:0004672|GO:0006468
Stsc60427g00022 481 PRINTS Tyrosine kinase catalytic domain signature 383 405 IPR001245 GO:0004672|GO:0006468
Stsc60427g00022 481 Gene3D - 60 191 IPR036770 -
Stsc60427g00022 481 MobiDBLite consensus disorder prediction 52 75 - -
Stsc60427g00022 481 PIRSF ILK 8 480 - -
Stsc60427g00022 481 ProSiteProfiles Protein kinase domain profile. 196 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60427g00022 481 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 153 462 - -
Stsc60427g00022 481 FunFam Integrin-linked protein kinase family 276 475 - -
Stsc60427g00022 481 SUPERFAMILY Protein kinase-like (PK-like) 213 459 IPR011009 -
Stsc60427g00022 481 SUPERFAMILY Ankyrin repeat 82 183 IPR036770 -
Stsc60427g00022 481 CDD STKc_MAP3K-like 206 459 - -
Stsc60427g00022 481 Pfam Protein tyrosine and serine/threonine kinase 208 458 IPR001245 GO:0004672|GO:0006468
Stsc60427g00022 481 ProSiteProfiles Ankyrin repeat profile. 112 144 IPR002110 GO:0005515
Stsc60427g00022 481 Pfam Ankyrin repeat 112 143 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60427g00022 Stsc-Chr60427 144942 150457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60427g00022 1 480 MAP Kinase Kinase Kinase AT2G43850 75.625 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Stsc60427g00022 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60427g00022 - - gmx:100810411 851.662