Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60427g00014 ATGGAGTTGGCCAAGCTTCTAACCATGCCAGAATTTCTGGCACTACTACTCCTTGTCCTCCTTTCACTTCATTTCATCACAAGAATGAATATGAATCGGAATTGGAATCGGAATCAGAATCAGAATCTTCCTCCGGGAAGCTATGGATGGCCAATTGTCGGAGAAACCTTCAAGTTTATAAGCGCTTCTCGCGAGGGAAGCGTGGTGAGGTTCATACAAGAGAGAATGGAGAGGTATGATTCGAGGGTGTACAAGACTTCGTTTCTTGGAGATCCCATGGCGGTGTTTTGCGGCCCGGCCGGAAATAAGTTCTTGTTTAGCAATGAGAACAAGAATGTGCAAGTGTGGTGGCCAAGCTCAGTTAAGAAGCTGCTAAGATCTTCTTTGGTTAATAAGGTTGGTGATGAAGCTAAGATGACTAGGAGGTTGCTCTTGACCTTTCTCAATCATGAAATGCTCAGAAATTTCGTCCCTAAAATGGATTCCATTGCTCAAATCCACATTGACACTCATTGGCAAGGAAAAGAAGAGGTGGTTGTTCATTCCACAGTGCAGATATACACATTTGCTTTGGCTTGTTCCTTGTTTCTGAGCATTGAAGGGCCTCTCCATGATTCAAAGATTTCCACAAGATTTCACCAATTCTTGAAAGGCCTGGTTGGTTTCCCCATCAACCTGCCCGGAACAAGATTTCACCAAGCAATGAAAGCTGCCAATGAAATAAGACAAGAGATAAGAAAGATAATTAAACAAAGAAAACTGGATTTGGAACAGAAAAGAGTGGTGTCACCAAGCCAAGACATTCTCTCACATTTGCTTGTAACACCTGACTCCAATGGAAGGTTCCTAACCGAAATCGAGATCATGGATAACATAATCCTCCTCCTTTTCGCCGGCCACGACACTTCTAGATCCACTCTGTCAGCTCTCATGAGATACTTGGCACAGTTTCCAGATGTTTATGACAAGGTTTTGGCAGAACAAGTTGAAATTAGCAGAGGAAAAGGGGAAGGTGAATCGCTGCAATGGGAGGATGTTCAGAAAATGAAGTATTCTTGGAATGTTGCTTCTGAAGTGTTGAGACTATCACCACCGGTTACCGGTGCTTATAGAGAAGCCTTAAAGGATTTCATCTATGCTGACTATACCATTCCCAAGGGTTGGAAGTTGCACTGGACAATCTGCTCTTCACACATGGATCCGAAGATATTCGCGAATCCGGAGGCGTTCGACGCATCGAGGTTTGAAGGGACAGGTCCGACGCCGTATTCTTATGTTCCGTTTGGTGGAGGGGCTAGAATGTGTCTGGGGCAGGAGTTTGCAAGGTTAGAGATACTTGTGTTCATGCATCACATTGTGAAACGGTTCAAATGGGATTTGGTTAATCCTAATGAGAAGTTCAAGTATGATCCCATGCTTGAACCTGTAAATGGACTTCCCATTCTGCTTCACCCTCACCCTTGA 1464 0.4413 MELAKLLTMPEFLALLLLVLLSLHFITRMNMNRNWNRNQNQNLPPGSYGWPIVGETFKFISASREGSVVRFIQERMERYDSRVYKTSFLGDPMAVFCGPAGNKFLFSNENKNVQVWWPSSVKKLLRSSLVNKVGDEAKMTRRLLLTFLNHEMLRNFVPKMDSIAQIHIDTHWQGKEEVVVHSTVQIYTFALACSLFLSIEGPLHDSKISTRFHQFLKGLVGFPINLPGTRFHQAMKAANEIRQEIRKIIKQRKLDLEQKRVVSPSQDILSHLLVTPDSNGRFLTEIEIMDNIILLLFAGHDTSRSTLSALMRYLAQFPDVYDKVLAEQVEISRGKGEGESLQWEDVQKMKYSWNVASEVLRLSPPVTGAYREALKDFIYADYTIPKGWKLHWTICSSHMDPKIFANPEAFDASRFEGTGPTPYSYVPFGGGARMCLGQEFARLEILVFMHHIVKRFKWDLVNPNEKFKYDPMLEPVNGLPILLHPHP 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60427g00014 487 FunFam Taxadiene 5-alpha hydroxylase 34 486 - -
Stsc60427g00014 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Stsc60427g00014 487 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00014 487 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00014 487 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00014 487 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00014 487 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00014 487 Gene3D Cytochrome P450 32 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00014 487 CDD CYP90-like 75 485 - -
Stsc60427g00014 487 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00014 487 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00014 487 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00014 487 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00014 487 Pfam Cytochrome P450 44 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00014 487 PANTHER CYTOCHROME P450 26 40 471 - -
Stsc60427g00014 487 SUPERFAMILY Cytochrome P450 40 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60427g00014 Stsc-Chr60427 78205 80591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60427g00014 42 390 Cytochrome P450 AT5G36110 44.034 1.05e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60427g00014 - K20667 adu:107480504 698.738