Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60427g00013 ATGGAAGTGGCCAAGTTTCTAGCCTTGCCAACAATTTTGGCACTCTTTATCCTCTCTCTTCATTTCATCACAAAGCTTGTGAAACTCAGAAAGGATCCAAACCTGAATCTTCCTCCTGGAAACTTAGGATGGCCTATTGTTGGAGAAACCTTGGAGTACATGCGCGCGGCTCGCGGGGGAACCTTGGTCAGCTTCATCAAAGAGAGAATGGAGAAACATGATTCAAGGGTGTTCAAGACTTCCTTTCTTGGAGATAATACGGCGGTGTTTTGCGGCTCGGCCGGGAACAAGTTCCTGTTCAGCAATGAGAATAAGTGTTTGCAATTGTGGTGGCCAAGCTCCATAAGGAAGCTGTTAGGAACTTCTCTTGTTAGTAAGGTTGGTGAAGAAGCAAAGATGACTAGAAGGTTGCTATTGAGCTTTCTTAGTGCAGAAGCACTCAGAAATTACTTGCCAAAAATGGATATCATTGCTCAAAACCATATCCAAACTCATTGGAAAGGAAAAGAGCAGGTGGTTGTGTACTCCACAGTGCAGCTATACACATATGCATTGGCTTGTTGCTTGTTCTTAAGCATTGAAGATCCAATCCATGTATCAGAATTTTCAGCAAAACTTGATGATTTTCTGGGAGGCTTGCTTGGCTTCCCAATCAACTTGCCTGGAACGAGATTTCATCGATCGAAGAAAGCCGCAGATGAAATAACCAAAGAAAAGGTGTCACCTACACAAGACCTTCTTTCATATTTGATTGTCACACCTGATTCCAATGGAAGATTCATGACTGAAACCGAGATTAGTGACAACATGCTACTGCTTCTTTTCGCCGGCCACGACACTGCTCGATCGGTTTTATCATCTATCATGAAGTATCTTGGGGCCATGCCTCAAGTTTATGAACAAGTTTTGAAGGAACAACTTGAAATAAGCAGAGAGAAGGAGGCAGGGGAGTTGTTGCAGTGGGAGGATATTCAGAAAATGAAGTATTCTTGGAATGTTGCATCTGAAGTCATGAGACTATTACCACCTGTCGCTGGTACTTACAGAGAAGCAATAAAGGATTTCCATTATGCTGGTTATACCATTCCTAAGGGTTGGAAGTTGCGTTGGGTCCCGAGTTCGACACACGTGGATCCGGCATATTTTCGGAATCCGGAAGCTTTTGATGCATCAAGGTTTGAAGGAGAAGGTCCCATACCCTATTCATATGTTCCATTTGGAGGAGGGCCTAGAATGTGTCTGGGAATAGAGTTTGCAAGGCTTGAGATACTTGTTTTCATGCATCACATTGTGAAATGGTTCAAATGGGATTTGGTGAATTCTGATGAAAATTTTAGGTATGATTCTCTGCTTCAACCAGCCAAAGGACTTCCAATTCGGCTTCACCCTCATGCCATTCATTGTTGA 1407 0.4314 MEVAKFLALPTILALFILSLHFITKLVKLRKDPNLNLPPGNLGWPIVGETLEYMRAARGGTLVSFIKERMEKHDSRVFKTSFLGDNTAVFCGSAGNKFLFSNENKCLQLWWPSSIRKLLGTSLVSKVGEEAKMTRRLLLSFLSAEALRNYLPKMDIIAQNHIQTHWKGKEQVVVYSTVQLYTYALACCLFLSIEDPIHVSEFSAKLDDFLGGLLGFPINLPGTRFHRSKKAADEITKEKVSPTQDLLSYLIVTPDSNGRFMTETEISDNMLLLLFAGHDTARSVLSSIMKYLGAMPQVYEQVLKEQLEISREKEAGELLQWEDIQKMKYSWNVASEVMRLLPPVAGTYREAIKDFHYAGYTIPKGWKLRWVPSSTHVDPAYFRNPEAFDASRFEGEGPIPYSYVPFGGGPRMCLGIEFARLEILVFMHHIVKWFKWDLVNSDENFRYDSLLQPAKGLPIRLHPHAIHC 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60427g00013 468 Pfam Cytochrome P450 240 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00013 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
Stsc60427g00013 468 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00013 468 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00013 468 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00013 468 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00013 468 PANTHER CYTOCHROME P450 26 33 441 - -
Stsc60427g00013 468 SUPERFAMILY Cytochrome P450 34 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00013 468 CDD CYP90-like 69 463 - -
Stsc60427g00013 468 Gene3D Cytochrome P450 27 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00013 468 FunFam Taxadiene 5-alpha hydroxylase 28 464 - -
Stsc60427g00013 468 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00013 468 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00013 468 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00013 468 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60427g00013 Stsc-Chr60427 75429 77552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60427g00013 36 369 Cytochrome P450 AT5G36110 42.614 6.57e-94 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60427g00013 - K20667 adu:107480504 836.639