Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60427g00011 ATGGAGGTGGCCAAATTTGTAACCTTGGTGGCACTTTTGTCTATCTTCTTCCTTTGTCTTCATCTCATCACAAAGTTTGTGAAACTGAGAAAGAAGCCAAGCCTGAATCTTCCTCCTGGAAGCTTAGGATGGCCCATCGTCGGAGAAACCTTTGAGTTCATGCGCGAATCGGGGAAGGGAAACATGTCAAGGTTCACACGAGATAGAATGGAGAAATATGATCCCAGGGTGTTCAAGACTTCATTTCTTGGAGATCCAATGGCTGTGTTTTGTGGCACGGCTGGGAACAAGTTCTTGTTCAGCAGTGAGAGCAAGGAAGTCCAACTATGGTGGCCTTCCTCAATAAGAAAGGTGTTAAGGACATCTCTCGTTACAAAGGTTGGTGAAGATGCAAAGTTGACCAGAAAGTTGCTCTTGACTTTTCTTAGCTCCGAAGCACTTAGGAATTTCGTCCCTAAAATGGATTCCATTGCTCGGACCCATTTAAATACACATTGGAGAGGAAAGGAGCAGGTGGTTGTGTATTACACAACACAGCTATACACATATTCATTGGCTTGTTGCTTATTTTTGAGCATTGAAGACTCAATCCATGTATCAAAGTTTTCATCAAAGTTTGAAGTGCTTGTCAAAGGCATGCTTGGCTTCCCCATCAACTTGCCAGGAACAAAATTCTATCAAGCCATGAAAGCTGCAGATGAAATAAGTGAGGAAATCAAAATGCTTATAAGGCAAAGGAAAGTGGATTTGGAAGAGAAGGCTTCAGCATCACAAAGCCAAGACCTGTTGTCTCATTTGCTTGTCACACCTGATGCCAGTGGAAGATTCATGTCTGAACAGGAAATTATAGACATCATGCTACAGCTGCTTTTCGCCGGCCACGACACTTCTCGGTCGGCCTTATCGTCTATCATGAAGTATCTTGGCAACATGCCTCAAGTTTATGAGAAGGTTTTGAAAGAACAAGTTGAAATAAGCAGAGAGAAAGGGGTAGGGGAATTGCTGCAATGGGAGGATATTCAGAAAATGAAGTATTCTTGGAATGTTGCATCTGAAGCCATGAGGCTGTCACCACCTGTTGCTAGTGCTTACAGAGAAGCAATAAGGGATTTTACCTTTGCTGGATATACCATTCCTAAGGGCTGGAAGTTGAACTGGACCACTTACTCAACACACATGGATCCGGCATACTTTCCGAATCCGGAATCTTTTGATGCGTCGAGGTTTGAAGGGGATGGTCCTACACCCTATTCATATGTTCCATTTGGAGGAGGGCCTAGAATGTGTCTGGGAATAGAGTTTGCAAGGCTTGAGATACTTGTGTTCATGCATCACATTGTGAAATGGTTCAAATGGGATTTGGTGAATCCTGATGAGAAGTTTAAGTATGATCCCTTGCTTGAGCCAGAAAATGGACTTCCAATTCTGCTTCATCCTCGCCATGTCTAG 1449 0.4341 MEVAKFVTLVALLSIFFLCLHLITKFVKLRKKPSLNLPPGSLGWPIVGETFEFMRESGKGNMSRFTRDRMEKYDPRVFKTSFLGDPMAVFCGTAGNKFLFSSESKEVQLWWPSSIRKVLRTSLVTKVGEDAKLTRKLLLTFLSSEALRNFVPKMDSIARTHLNTHWRGKEQVVVYYTTQLYTYSLACCLFLSIEDSIHVSKFSSKFEVLVKGMLGFPINLPGTKFYQAMKAADEISEEIKMLIRQRKVDLEEKASASQSQDLLSHLLVTPDASGRFMSEQEIIDIMLQLLFAGHDTSRSALSSIMKYLGNMPQVYEKVLKEQVEISREKGVGELLQWEDIQKMKYSWNVASEAMRLSPPVASAYREAIRDFTFAGYTIPKGWKLNWTTYSTHMDPAYFPNPESFDASRFEGDGPTPYSYVPFGGGPRMCLGIEFARLEILVFMHHIVKWFKWDLVNPDEKFKYDPLLEPENGLPILLHPRHV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60427g00011 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Stsc60427g00011 482 Gene3D Cytochrome P450 27 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00011 482 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00011 482 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00011 482 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00011 482 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00011 482 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00011 482 SUPERFAMILY Cytochrome P450 33 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00011 482 PANTHER CYTOCHROME P450 26 33 462 - -
Stsc60427g00011 482 CDD CYP90-like 69 479 - -
Stsc60427g00011 482 FunFam Taxadiene 5-alpha hydroxylase 28 480 - -
Stsc60427g00011 482 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00011 482 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00011 482 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00011 482 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00011 482 Pfam Cytochrome P450 38 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60427g00011 Stsc-Chr60427 66554 68970 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60427g00011 36 384 Cytochrome P450 AT5G36110 42.045 1.58e-96 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60427g00011 - K20667 adu:107480500 847.81