Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60427g00009 ATGAAGTATTCTTGGAATGTTGCATCTGAAGTCATGAGGTTGTTTCCACCTGTTGATGGTACTTACAGACAAGCATTAAAGGATATTCACTATGCTGGCTATACCATTCCTAAGAATTGGAAGTTACGTTGGATCCCTGCTTCGACACACATGGATCCGGCGTATTTTCGGAATCCAGAAGCTTTTGATGCATCAAGGTTTGAAGGAGAAGGTCCCATACCCTATTCATATGTTCCATTTGGAGGAGGGCCTAGAATGTGTCTGGGAATAGAGTTTGCAAGGCTTGAGATACTTGTGTTCATGCATCACATTGTGAAATTGTTCAAATGGGATTTGGTGAATTCTGATGAGAATTTTAAGTATGGTACCTTGCTTGAGCCACCCAAAGGACTTCCAATTCGGCTTCACCCTCATACCACCATTGATTCAGACAAGAGGCTTTGA 444 0.4212 MKYSWNVASEVMRLFPPVDGTYRQALKDIHYAGYTIPKNWKLRWIPASTHMDPAYFRNPEAFDASRFEGEGPIPYSYVPFGGGPRMCLGIEFARLEILVFMHHIVKLFKWDLVNSDENFKYGTLLEPPKGLPIRLHPHTTIDSDKRL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60427g00009 147 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00009 147 PRINTS P450 superfamily signature 6 17 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00009 147 PRINTS P450 superfamily signature 78 87 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00009 147 Gene3D Cytochrome P450 1 138 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00009 147 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 80 89 IPR017972 GO:0005506|GO:0016705
Stsc60427g00009 147 PANTHER CYTOCHROME P450 26 1 115 - -
Stsc60427g00009 147 Pfam Cytochrome P450 1 130 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00009 147 SUPERFAMILY Cytochrome P450 1 137 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00009 147 PRINTS B-class P450 signature 51 66 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00009 147 PRINTS B-class P450 signature 6 17 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00009 147 PRINTS B-class P450 signature 87 98 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00009 147 PRINTS B-class P450 signature 23 50 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60427g00009 147 PRINTS B-class P450 signature 78 87 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60427g00009 Stsc-Chr60427 64722 65327 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60427g00009 1 139 Cytochrome P450 AT3G19270 38.849 8.19e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60427g00009 - K20667 adu:107480504 269.24